Pairwise Alignments

Query, 343 a.a., putative transcriptional regulator, lacI family from Phaeobacter inhibens DSM 17395

Subject, 332 a.a., periplasmic binding protein/LacI transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 11/329 (3%)

Query: 15  VSGISRPTLSKFFNDPDSVRKSTRERIEEALEKFDYRPNLYAMNQNRRLTKTIGIVVPNL 74
           ++G+S  T+S+  N+   V   TR+++ +A+ K DYRPN  A +     + +IG++V  L
Sbjct: 10  LAGVSLATVSRVVNNTGKVSDKTRQKVHDAMAKLDYRPNTIAQSLASNRSNSIGVLVSQL 69

Query: 75  TDPFFAKISRHIEDHVIAAGYRPVLLGSNGTPAQELENLNNLRLLKPAGTLLAPLGRVSE 134
             PF+  + R +E  + AA    ++   +   AQE + +  L L +    L+     +S 
Sbjct: 70  DGPFYGPMMREVESALRAANKHVIIAAGHSDAAQEKDGVEFL-LSRGCDALIVDAEILSN 128

Query: 135 TPQIREFCNEVPTVLFDANLENTGEAFIGSDNQQSVTTIVEYLCRTGDAPAFFEMKTPTN 194
              +     + P VL + +++   E  +  +N Q       ++   G     +       
Sbjct: 129 GYLVELCQGKTPVVLINRHVDGIDERCVHLNNLQGGLLASRHVLEKGHKQIAYISGPLFK 188

Query: 195 PNAVKRRNAYISSMERLGHR-PELIQVDGDGWDFEEIGFREGTRLLSGQRSATNTILCSN 253
            +A +R   +  ++   G    E +  +GD    EE G+    +LLS  R  T  ++C+N
Sbjct: 189 LDARERLEGHRQALAEQGIAFDENLFYEGD--FREEGGYEAMAQLLSRGRDFT-AVVCAN 245

Query: 254 DRLAIGLLSAAYQLGLRVGLGDGCALRVAGHDDHPFSRYTCPTLTTVSQDYTAIARTSAE 313
           D++A G ++   + GLRV       +   G D+ PF RY  P LTTV      + R +A 
Sbjct: 246 DQMASGAIAQCLERGLRVPED----ISFVGFDNIPFPRYISPKLTTVCNPIQDMGRMAAH 301

Query: 314 TLVARIEGNALADSRQDILFDGQLVMRGS 342
            ++  +      D      F+ +LV+R S
Sbjct: 302 WVLREVYDQ--TDVTFCHRFEPELVVRDS 328