Pairwise Alignments

Query, 433 a.a., ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data) from Phaeobacter inhibens DSM 17395

Subject, 424 a.a., extracellular solute-binding protein, family 1 (NCBI) from Rhodospirillum rubrum S1H

 Score =  104 bits (260), Expect = 5e-27
 Identities = 108/416 (25%), Positives = 176/416 (42%), Gaps = 38/416 (9%)

Query: 18  STAAFADTITIATVNNGDMIRMQGLTEDFTAKTGHEVEWVTLEENVLRQRVTTDISAKGG 77
           +T A A+TITI   +  D   ++ L  DF   TG  V    +    +  ++   + ++ G
Sbjct: 15  ATTARAETITILMESVPDTQYVKTLVPDFEKATGITVNLEVVNYAEMHTKLVPQLVSRKG 74

Query: 78  QFDIMTIGMYETPIWGKNGWLVPLND-LPAD-YDVDDILPAMRGGLSH-DGTLFAAPFYG 134
            +  + +  Y    + K GWL PL++ + AD +D    +PA+   +   DGT +  PFY 
Sbjct: 75  GYSAIVVDFYWVGEFIKAGWLQPLDERIGADHFDTAPYIPALMDLVGKVDGTTYMLPFYN 134

Query: 135 ESSMIMYRTDLM-----EKA-----GLEMPAAPTWD-FVADAARQMTDKDNETYGICLRG 183
            +  + YRTDL+     +KA        + A  TWD +    A    D  N      LR 
Sbjct: 135 YAMGLTYRTDLLTDPANQKAYEAANNAPLRAPETWDEYRKQVAFFTKDGFNGVVNQGLRP 194

Query: 184 KAGWGENAAFITAMSNSFGARWFDENWAPQFDSEAWSNTLNFYINLLNDAGPPGASNNGF 243
                E + ++ A   SF     D NW    +S      L+ YI  ++  GP G+++  F
Sbjct: 195 DPIAMEWSNYLFANGGSF----HDANWKSTLNSPEAKAALDQYIESIDKYGPLGSASFSF 250

Query: 244 NENLSLFQQGKCGMWIDATVAASFVTNPNDSTVADKVGFALAPDTGLGKRSNWLWAWALA 303
           +E  ++  QGK   +I      + + NP+ S+V  K      P        +   AW   
Sbjct: 251 DEAFNVMAQGKAYSYITYNFFRTSLDNPSQSSVVGKAEILPVPGVTPETSGSLNGAWGWG 310

Query: 304 IPAGTQKEAAAKEFIQWATSKDYIELVAENEGWANVPPGARISLYENAN-YKDIPFAKMT 362
           IP  +    AA +F+ W  S    +  A   G        R  ++++A      P+ +  
Sbjct: 311 IPKSSPNPDAAWKFLSWVESFPIAKARALQGG-----APTRSDVFDDAEVLAKYPYYR-D 364

Query: 363 LESILSADPNNPTVDPVPYVGIQFAAIPEFAGIATQVGQEFSAALAGQQTAEEALA 418
           L+ +L    N PT          F   P+F  I   +G+E S A+A ++T+E ALA
Sbjct: 365 LKRLLERSHNFPT----------FTYTPQFVEI---LGRELSLAVAKEKTSEAALA 407