Pairwise Alignments

Query, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Phaeobacter inhibens DSM 17395

Subject, 445 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Pseudomonas fluorescens FW300-N2E2

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 16/148 (10%)

Query: 65  TPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQKAGSDIELSKSNILLIGPTGCG 124
           TP++I   L+ ++IGQ  AKR +++A+ N ++R+   ++    +E++  NIL+IGPTG G
Sbjct: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPEELR--VEVTPKNILMIGPTGVG 61

Query: 125 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVYID 184
           KT +A+ LA++ + PF   +AT  TE GYVG DVE+II  L  A+   + R Q       
Sbjct: 62  KTEIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIRDLADAA-IKLLREQ------- 113

Query: 185 EVDKITRKSENPSITRDVSGEGVQQALL 212
           E+ K+  ++E      D + E +  ALL
Sbjct: 114 EITKVRHRAE------DAAEERILDALL 135



 Score = 80.5 bits (197), Expect = 9e-20
 Identities = 78/266 (29%), Positives = 116/266 (43%), Gaps = 66/266 (24%)

Query: 159 ENIILKLLQASEYNVERAQRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGT 218
           E +  K L+A E      Q GIV+IDE+DK+ ++        DVS EGVQ+ LL L+EG 
Sbjct: 235 EELKAKALEAVE------QHGIVFIDEIDKVAKRGNVGGA--DVSREGVQRDLLPLIEGC 286

Query: 219 VASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSD 278
             +            +   V T +ILFI  GAF  L K                      
Sbjct: 287 TVNT-----------KLGMVKTDHILFIASGAFH-LSK---------------------- 312

Query: 279 AGVGETFKDLEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRL 338
                      P DL     +PE  GRLP+   L+ L  +    IL++P  +L +QY  L
Sbjct: 313 -----------PSDL-----VPELQGRLPIRVELKALTPEDFERILSEPHASLTEQYCAL 356

Query: 339 FELEDTELDFTEEALSSIAKKA--IERKT---GARGLRSILEDILLNTMF---ELPGMDS 390
            + E   ++FT E +  +A+ A  +  KT   GAR L ++LE +L    F   +L    +
Sbjct: 357 LKTEGLNIEFTPEGIKRLAQIAWQVNEKTENIGARRLHTLLERLLEEVSFSAGDLASAHN 416

Query: 391 VEKVVVNEEAVNSDAQPLMIHADAEK 416
              ++++ E VNS    L  + D  +
Sbjct: 417 EAPILIDAEYVNSHLGELAQNEDLSR 442