Pairwise Alignments

Query, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Phaeobacter inhibens DSM 17395

Subject, 435 a.a., ATP-dependent protease ATP-binding subunit HslU from Sinorhizobium meliloti 1021

 Score = 92.8 bits (229), Expect = 2e-23
 Identities = 72/227 (31%), Positives = 113/227 (49%), Gaps = 21/227 (9%)

Query: 65  TPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQKAGSDI--ELSKSNILLIGPTG 122
           +P++I   LD Y+IGQ  AKR +++A+ N ++R    Q+   ++  E+   NIL+IGPTG
Sbjct: 5   SPREIVSELDRYIIGQKDAKRAVAIALRNRWRR----QQLDDELRDEVMPKNILMIGPTG 60

Query: 123 CGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRGIVY 182
            GKT +++ LA++   PF   +AT  TE GYVG DVE I+  L++     V   +R  V 
Sbjct: 61  VGKTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIVRDLVEVGISLVREKRRAEVK 120

Query: 183 IDE--------VDKITRKSENPSITRDVSGEGVQQALL--KLMEGTVASV-PPQGGRKHP 231
                      +D +   + +P+ TRD   + ++   L  K +E  VA    P G  + P
Sbjct: 121 AKAHQNAEERVLDALVGTTASPA-TRDSFRKKLRANELDDKEIEVDVAEAGSPGGAFEIP 179

Query: 232 QQEFLQVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSD 278
                 +   N+  + G A  G  K +K   K S   +   V D+SD
Sbjct: 180 GMPGANIGVLNLSEMFGKALGGRTKKVKTTVKDS---YALLVNDESD 223



 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 58/243 (23%)

Query: 179 GIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGGRKHPQQEFLQV 238
           GIV++DE+DKI  +     I   VS EGVQ+ LL L+EGT  +            ++  V
Sbjct: 243 GIVFLDEIDKIATREGG--IGAGVSREGVQRDLLPLVEGTTVAT-----------KYGPV 289

Query: 239 DTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAGVGETFKDLEPEDLLKFGL 298
            T +ILFI  GAF                                     +P DLL    
Sbjct: 290 KTDHILFIASGAF----------------------------------HVAKPSDLL---- 311

Query: 299 IPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTEEALSSIAK 358
            PE  GRLP+   L  L ++    ILT+ + +L++QY+ L E E   LDFTE+A+ ++A+
Sbjct: 312 -PELQGRLPIRVELRALTKEDFRRILTETEASLIRQYKALLETEGVALDFTEDAIDALAE 370

Query: 359 KAIE-----RKTGARGLRSILEDILLNTMFELPGMDSVEKVVVNEEAVNSDAQPLMIHAD 413
            A++        GAR L++++E +L +  F  P     + V ++ E V      L  + D
Sbjct: 371 VAVQLNANVENIGARRLQTVMERVLDDVSFNAPDRGG-QGVTIDAEYVRRHVGDLAANTD 429

Query: 414 AEK 416
             +
Sbjct: 430 LSR 432