Pairwise Alignments

Query, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Phaeobacter inhibens DSM 17395

Subject, 425 a.a., ATP-dependent protease ATP-binding subunit ClpX (RefSeq) from Shewanella amazonensis SB2B

 Score =  563 bits (1452), Expect = e-165
 Identities = 287/423 (67%), Positives = 346/423 (81%), Gaps = 4/423 (0%)

Query: 1   MATNSSGDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREETKA-SGLKS 59
           M  N +GD    LYCSFCGKSQHEVRKLIAGP+V++CDECVELC DIIREE K  S  + 
Sbjct: 1   MGENKTGDGGKLLYCSFCGKSQHEVRKLIAGPSVYVCDECVELCNDIIREEIKEISPKRD 60

Query: 60  TDGVPTPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQKAGSDIELSKSNILLIG 119
            D +PTP ++   LDDYVIGQ  AK+VLSVAV+NHYKRL +A      +EL KSNILLIG
Sbjct: 61  QDKLPTPHELRAHLDDYVIGQEKAKKVLSVAVYNHYKRLRNAGPKDG-VELGKSNILLIG 119

Query: 120 PTGCGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQASEYNVERAQRG 179
           PTG GKTLLA+TLAR L+VPFTMADATTLTEAGYVGEDVENII KLLQ  +Y+VE+AQRG
Sbjct: 120 PTGSGKTLLAETLARFLNVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRG 179

Query: 180 IVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGGRKHPQQEFLQVD 239
           IVYIDE+DKI+RKS+NPSITRDVSGEGVQQALLKL+EGTVA+VPPQGGRKHPQQEFLQVD
Sbjct: 180 IVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVD 239

Query: 240 TTNILFICGGAFAGLDKIIKQR-GKGSAMGFGADVR-DDSDAGVGETFKDLEPEDLLKFG 297
           T+ ILFICGGAFAGL+K+I+QR   GS +GFGA V+  +    + +    +EPEDL+K+G
Sbjct: 240 TSKILFICGGAFAGLEKVIEQRTHTGSGIGFGAQVKGKEEKESMSDILSQVEPEDLVKYG 299

Query: 298 LIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTEEALSSIA 357
           LIPEF+GRLPV+ATL +LDEDALI IL++PKNAL KQY  LFE+E+ EL+F E+AL +IA
Sbjct: 300 LIPEFIGRLPVVATLAELDEDALIQILSEPKNALTKQYAALFEMENVELEFREDALKAIA 359

Query: 358 KKAIERKTGARGLRSILEDILLNTMFELPGMDSVEKVVVNEEAVNSDAQPLMIHADAEKE 417
           +KA+ RKTGARGLRSI+E ILL+TM++LP    V K VV+E  V  ++ P++I+   E +
Sbjct: 360 QKAMSRKTGARGLRSIVEGILLDTMYDLPSQQGVSKAVVDESVVKGESAPILIYEQTESQ 419

Query: 418 SAT 420
           +A+
Sbjct: 420 AAS 422