Pairwise Alignments

Query, 422 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Phaeobacter inhibens DSM 17395

Subject, 441 a.a., ATP-dependent protease ATP-binding subunit (RefSeq) from Shewanella loihica PV-4

 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 46/105 (43%), Positives = 68/105 (64%), Gaps = 2/105 (1%)

Query: 65  TPKDICEVLDDYVIGQAMAKRVLSVAVHNHYKRLNHAQKAGSDIELSKSNILLIGPTGCG 124
           TP++I   LD ++IGQ  AKR +++A+ N ++R+     A    E++  NIL+IGPTG G
Sbjct: 5   TPREIVHELDSHIIGQQNAKRSVAIALRNRWRRMQ--LDAALRQEVTPKNILMIGPTGVG 62

Query: 125 KTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQAS 169
           KT +A+ LA++   PF   +AT  TE GYVG++VE II  L  A+
Sbjct: 63  KTEIARRLAKLAKAPFIKVEATKFTEVGYVGKEVEQIIRDLTDAA 107



 Score = 84.0 bits (206), Expect = 8e-21
 Identities = 75/245 (30%), Positives = 111/245 (45%), Gaps = 58/245 (23%)

Query: 177 QRGIVYIDEVDKITRKSENPSITRDVSGEGVQQALLKLMEGTVASVPPQGGRKHPQQEFL 236
           Q GIV++DE+DKI ++ +      DVS EGVQ+ LL L+EG   +       KH      
Sbjct: 247 QHGIVFLDEIDKICKRGDTSG--PDVSREGVQRDLLPLVEGCTVNT------KHGM---- 294

Query: 237 QVDTTNILFICGGAFAGLDKIIKQRGKGSAMGFGADVRDDSDAGVGETFKDLEPEDLLKF 296
            V T +ILFI  GAF        Q  K                          P DL   
Sbjct: 295 -VKTDHILFIASGAF--------QMSK--------------------------PSDL--- 316

Query: 297 GLIPEFVGRLPVLATLEDLDEDALITILTKPKNALVKQYQRLFELEDTELDFTEEALSSI 356
             IPE  GRLP+   LE L  +    ILT+P  +L +QY  L   E  +++F+E  +  I
Sbjct: 317 --IPELQGRLPIRVELEALSANDFKRILTEPHASLTEQYVALMATEGVKVEFSESGIERI 374

Query: 357 AKKA--IERKT---GARGLRSILEDILLNTMFELPGMDSVEKVVVNEEAVNSDAQPLMIH 411
           A+ A  +  +T   GAR L +++E ++ +  FE     S    V++ + VN+  + L+  
Sbjct: 375 AQAAWQVNERTENIGARRLHTVMERLMEDLSFEASD-KSGSTTVIDADYVNAHLENLVQD 433

Query: 412 ADAEK 416
            D  +
Sbjct: 434 EDLSR 438