Pairwise Alignments

Query, 353 a.a., tRNA 2-selenouridine synthase SelU from Phaeobacter inhibens DSM 17395

Subject, 372 a.a., tRNA 2-selenouridine synthase (RefSeq) from Shewanella loihica PV-4

 Score =  122 bits (306), Expect = 1e-32
 Identities = 94/326 (28%), Positives = 153/326 (46%), Gaps = 39/326 (11%)

Query: 19  VIDVRSPAEFAEDHWPGAINLPVLDNEERAEVGTIYVQESPFLARKVG----AAKVFRNA 74
           ++DVR+P EF +  +P + N P++ ++ER +VGT Y +     A  +G       V +  
Sbjct: 25  IMDVRAPIEFTKGAFPASSNHPLMRDDERQQVGTCYKEHGQDAAIALGHSLVCGAVKQQR 84

Query: 75  ADHVEQRLSHHPGSWRPLVYCWRGGQRSGSFTWLLQQIGWRADVVEGGYQSYRRLVNDYL 134
            D     L  HP ++   +YC+RGG RS      L + G     ++GGY++ R+ + D +
Sbjct: 85  VDAWLAYLDAHPDAY---LYCFRGGLRSQLTQQWLAEAGRDVPYIQGGYKAMRQYLIDTI 141

Query: 135 YKTELPHRFVALDGYTGTAKTEILKRVQSLGGQVLDLEGLAHHRGSLLGDHPTPQPSQKA 194
            +       + L G TG+ KT+ L + Q    + +DLEGLAHHRGS  G +   QP+Q  
Sbjct: 142 DRAPEARPMLILSGITGSGKTDFLLQRQ----EAVDLEGLAHHRGSSFGRYHEGQPTQIN 197

Query: 195 FESEIAGQLAR--MTPDQPVLVEAESSKIGARIIPPRLWSGMKRAPRIAVEASIAARCRY 252
           FE+ +   L +   +P + +L+E ES  IG   +P   + GM+ A  + +E  + AR   
Sbjct: 198 FENSLGVALLKHQQSPARILLLEDESYLIGRSALPKAFYMGMQAASVVILEEPLEARLTR 257

Query: 253 LLAGYDDILSNGDMLRI---------------RLDGLRAHRSNAVVDGWLQLI------- 290
           LL  Y   +  G + R+                + G++        D   Q+I       
Sbjct: 258 LLDEYVHKMHRGYVERLGEEAGFEAFAEYLANSISGIKKRLGGKQHDELQQMITDALAVQ 317

Query: 291 -DAGDKPALTE---ALMVQHYDPAYE 312
              GD  A  E    L+ ++YDP Y+
Sbjct: 318 TQRGDTQAHLEWIALLLSKYYDPMYQ 343