Pairwise Alignments

Query, 457 a.a., chemoreceptor McpA from Phaeobacter inhibens DSM 17395

Subject, 673 a.a., methyl-accepting chemotaxis protein from Caulobacter crescentus NA1000

 Score =  312 bits (800), Expect = 2e-89
 Identities = 171/312 (54%), Positives = 223/312 (71%)

Query: 136 VEDISKGLEALSEGDLSYRVQPSDLPDMRVLCEAFNNAQDTLNGAVETVKAVADAVGSTA 195
           V ++++GLE L+ GDL++RV      D R L + FN A  +L   ++ + A  D + + A
Sbjct: 319 VSNLAEGLEKLASGDLTFRVTADFPGDYRKLKDDFNAAMGSLQETMKVIAASTDGLSTGA 378

Query: 196 SEISQSSSELSHRTETQAATLEETAAAIEELTSTVRSAADGAREVEDIVSNARATAEESG 255
            EI+ +S +LS RTE QAA+LEETAAA++ELT+TVR  A GAR+  D+VS  R  A  SG
Sbjct: 379 DEIAHASDDLSRRTEQQAASLEETAAALDELTATVRRTAAGARQASDVVSTTRGEATHSG 438

Query: 256 EVVSNAVTAMSQIEESSGKISQIISVIDDIAFQTNLLALNAGVEAARAGEAGRGFAVVAS 315
           +VV  AV+AM +IE+SSG+ISQII VID+IAFQTNLLALNAGVEAARAGEAGRGFAVVA 
Sbjct: 439 QVVHQAVSAMGEIEKSSGQISQIIGVIDEIAFQTNLLALNAGVEAARAGEAGRGFAVVAQ 498

Query: 316 EVRALAQRSSDAAGEIKQLINESSQYVGNGVKLVSRAGEELQKIIGSVSTISGHVSQIAT 375
           EVRALAQRS++AA EIK LI+ S+Q V  GV LV + GE LQ+I+  V  I   V++IA 
Sbjct: 499 EVRALAQRSAEAAKEIKALISSSTQQVSQGVSLVGQTGEALQRIVTKVGEIDALVTEIAA 558

Query: 376 GAAEQSVTLVEINTGVSQLDQVTQHNAAMVEEATAASQTLSNDANELTRQISIFKTGSGT 435
            AAEQ+  L E+NT V+Q+DQVTQ NAAMVE++TAA+ +L  +  EL R ++ F+ GSG+
Sbjct: 559 SAAEQATGLNEVNTAVNQMDQVTQQNAAMVEQSTAATHSLKGETAELVRLMARFQVGSGS 618

Query: 436 QNIVSFGSGSAG 447
            +        AG
Sbjct: 619 SSYARPAVADAG 630



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 84/373 (22%), Positives = 139/373 (37%), Gaps = 103/373 (27%)

Query: 120 VRVIKLATDITARQNSVEDISKGLEALSEGDLSYRVQPSDLPDMRVLCEAFNNAQDTLNG 179
           V  +   T +T R+ S+ DI+   + LS+GD S      DL  M           D L G
Sbjct: 223 VGALAFLTVMTTRK-SINDIAAATDKLSKGDNSI-----DLEKM--------TRGDELGG 268

Query: 180 AVETVKAVADAVGSTASEISQSSSELSHRTETQAATLEETAAAIEELTSTVRSAADGARE 239
            V  +K   D                    E   A  E++AA    LT+  R + + A  
Sbjct: 269 IVTALKVFRDN---------------QVHLEQLRADQEKSAA----LTADERRSKEAA-- 307

Query: 240 VEDIVSNARATAEESGEVVSNAVTAMSQI------------------------EESSGKI 275
                  A A A+E+  VVSN    + ++                          + G +
Sbjct: 308 -------AAAAAQEASLVVSNLAEGLEKLASGDLTFRVTADFPGDYRKLKDDFNAAMGSL 360

Query: 276 SQIISVI-----------DDIAFQTNLLALNAGVEAARAGEAGRGFAVVASEVR---ALA 321
            + + VI           D+IA  ++ L+     +AA   E       + + VR   A A
Sbjct: 361 QETMKVIAASTDGLSTGADEIAHASDDLSRRTEQQAASLEETAAALDELTATVRRTAAGA 420

Query: 322 QRSSDAAGEIKQLINESSQYVGNGVKLVSRAGEELQKIIGSVSTISGHVSQIATGAAEQS 381
           +++SD     +     S Q V   V  +     E++K  G +S I G + +IA       
Sbjct: 421 RQASDVVSTTRGEATHSGQVVHQAVSAMG----EIEKSSGQISQIIGVIDEIAF-----Q 471

Query: 382 VTLVEINTGV--SQLDQVTQHNAAMVEEATAASQTLSNDANEL-------TRQIS----- 427
             L+ +N GV  ++  +  +  A + +E  A +Q  +  A E+       T+Q+S     
Sbjct: 472 TNLLALNAGVEAARAGEAGRGFAVVAQEVRALAQRSAEAAKEIKALISSSTQQVSQGVSL 531

Query: 428 IFKTGSGTQNIVS 440
           + +TG   Q IV+
Sbjct: 532 VGQTGEALQRIVT 544