Pairwise Alignments

Query, 842 a.a., two-component regulatory system, sensory/regulatory protein from Phaeobacter inhibens DSM 17395

Subject, 1358 a.a., PAS domain-containing protein from Dyella japonica UNC79MFTsu3.2

 Score =  300 bits (768), Expect = 4e-85
 Identities = 200/557 (35%), Positives = 296/557 (53%), Gaps = 36/557 (6%)

Query: 297  IQTLKRRERELEALSRRLEMAVETSKIGIWEI-EDNSDSAIWDHRMRELYGDPVGSSDVP 355
            I   K  E  + AL+ RL++A+  S +GIWE+ E    S  WD  M  LY    G+    
Sbjct: 533  ITARKESEAAILALNERLQLALGVSGVGIWELPEVTGQSFTWDEPMHALYRMAPGTFSGR 592

Query: 356  LTVWRSFLHPNDRDRVINGFQEALRHVRNHSID--FRVRLENGTHKNIRAMGCSFRDSRG 413
            L  W   +HP DR  ++  +++AL     H+ D  FR++   G  +++RA    FR + G
Sbjct: 593  LQDWLERIHPEDRAALLKRWEDALGDAHAHAFDTEFRIQWPTGEVRHLRAQAQIFRAADG 652

Query: 414  RN-RMIGVEWDVTRDVDLNNELKRTNQQLTHRNAQLTYAKQAAEKADQAKTEFLANMSHE 472
               R IGV  D+T +       +R  + L H       AK+AAE A++AK++FLA MSHE
Sbjct: 653  APLRAIGVNRDITDE-------RRAAEVLLH-------AKEAAESAERAKSDFLAVMSHE 698

Query: 473  IRTPMNGIIGMSDILAESPLSAEQEQCVDTIRDSSVALLKIINDILDLSRLEAGKMEIST 532
            IRTPMN ++GMS +  ++ L+ +Q   +  +  S+  LL IIN++LD S++EAG + +  
Sbjct: 699  IRTPMNTVLGMSRLALQTELAPKQRNYLGKVHASAENLLTIINNVLDYSKIEAGGLALEA 758

Query: 533  VDFNLRKCVDGAVDVLRPKLREKGLTFTQTFARELPEQVHGDDGRLRQILVNLLSNAVKF 592
             DF L   +D    V   K  EKGL    T    +PE + GD  RL Q+L+NL+SNAVKF
Sbjct: 759  ADFTLSSVLDAVAAVTAMKAEEKGLEIAYTTTAGVPEHLVGDAFRLGQVLINLVSNAVKF 818

Query: 593  TQYGSVSLHVSRDVK---DPYHLFIDVVDTGIGISEDQARHVFERFSQADAATTRHYGGT 649
            T  G V + V    K       L  +V DTGIG+   QA  +F+ F+QA++AT+R YGGT
Sbjct: 819  TARGEVIVSVCLVDKLDGQRSRLRFEVRDTGIGLDAWQADRLFQAFNQAESATSRKYGGT 878

Query: 650  GLGLTISNILAQRMGGGISLNSNEGQGSCFRLEIRLSAARAAPSAPTQISPEAAQLKPGP 709
            GLGL I   L + MGG I + S  G+G+ F   I +   +   + P       A  +PG 
Sbjct: 879  GLGLVICRRLVELMGGSIGVRSKPGEGATFHFTIDVGVRQGLEAQP------FAGRQPGL 932

Query: 710  G--VLLLADDNRTNRLLIRKFLADTPLNVIEAENGREAVD----MCRDHQP-AIILMDMS 762
                +L+ DDN + R +  + L    +NV  A +G+EA++      RD +   ++LMD  
Sbjct: 933  AGKRVLVTDDNASARSIFARMLRQFRMNVTTAASGQEAIEALKNAARDQRAFDLVLMDWR 992

Query: 763  MPEVDGLTATRQIRTSNMAQ--PAIIALTANAFESDRRACLDAGMDRFLQKPIRKPLLLE 820
            MP +DGL   R+IR  +  Q  PA++ +TA   E          +D  L KP+ +  LLE
Sbjct: 993  MPGLDGLEVARRIRADHELQQTPAVLMVTAYGREEVIHQVEQLQLDGLLIKPVTESTLLE 1052

Query: 821  TIASVQAERAAPPDQTK 837
            T+ S+ A+R +    T+
Sbjct: 1053 TVESIFAQRDSTDAPTR 1069



 Score = 69.7 bits (169), Expect = 1e-15
 Identities = 51/146 (34%), Positives = 75/146 (51%), Gaps = 9/146 (6%)

Query: 687  AARAAPSAPTQ-ISPEAAQLKPGPGV-------LLLADDNRTNRLLIRKFLADTPLNVIE 738
            A R +  APT+ ++P  A    G  +       +L+ DD+  NR +  +FL    L V  
Sbjct: 1059 AQRDSTDAPTRRVAPTDALTSAGAILGNCRGQRVLVVDDHALNREVASEFLLAAGLAVDV 1118

Query: 739  AENGREAVDMCRDHQPAIILMDMSMPEVDGLTATRQIRT-SNMAQPAIIALTANAFESDR 797
            A +G  A+          +L+D+ MP +DGL   R+IR  +  A   IIALTA A   DR
Sbjct: 1119 APDGESALSRLASQHYDAMLLDIHMPGMDGLATAREIRRHARWAHLPIIALTALARPQDR 1178

Query: 798  RACLDAGMDRFLQKPIRKPLLLETIA 823
             A ++AGM+  L KP+   +L ET+A
Sbjct: 1179 AASMEAGMNAHLTKPLDAGMLYETLA 1204



 Score = 41.6 bits (96), Expect = 3e-07
 Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 301 KRRERELEALSRRLEMAVETSKIGIWEIEDNSDSAIWDHRMRELYGDPVGSSDVPLTVWR 360
           K  E EL     R + A++ S  GIW+ +  S    + H+ + + G         ++ W 
Sbjct: 407 KLAELELRRSEARWQFALDGSGDGIWDWDMRSGHVFYSHQWKAMLGHAEEDIGSTVSEWS 466

Query: 361 SFLHPNDRDRVINGFQEALRHVRNHSIDF----RVRLENGTHKNIRAMGCSF-RDSRGRN 415
             +HP+D  R  +  +    H++  S+DF    R+R  +G  + I   G    R + G+ 
Sbjct: 467 QRVHPDDVARCWDIIE---AHLQGRSLDFVLEHRMRTRDGRWRWILDRGKVIERGTDGQP 523

Query: 416 -RMIGVEWDVTRDVDLNNELKRTNQQL 441
            R+IG   D+T   +    +   N++L
Sbjct: 524 LRVIGTHTDITARKESEAAILALNERL 550



 Score = 39.3 bits (90), Expect = 2e-06
 Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 6/170 (3%)

Query: 284 ALAGRLSAARRSVIQTLKRRERELEALSRRLEMAVETSKIGIWEIEDNSDSAIWDHRMRE 343
           A AG     + S I   ++ E  LE   RR    +  S+  +W+    +       + + 
Sbjct: 120 AAAGAGYFIQLSDISAQQQAELALEEAQRRWNQTLSGSRQVVWDFHVPTGMVEVSSQWQV 179

Query: 344 LYGDPVGSSDVPLTVWRSFLHPNDRDRVINGFQEALRHVRNHSIDFRVRLENGTHKN--- 400
           +   P       ++ W S +HP+D+ R+     E +R       D   RL + T      
Sbjct: 180 MLDLPDEEHVHHISRWLSRMHPDDQGRLFEA-TERVRISGEREFDAYYRLRHQTQDRWIW 238

Query: 401 --IRAMGCSFRDSRGRNRMIGVEWDVTRDVDLNNELKRTNQQLTHRNAQL 448
              R     +       RMIG   DVT + +L   L  T ++LT +  QL
Sbjct: 239 VLSRGRVVEYAPDGSILRMIGTIIDVTHEKELEARLTATTERLTAQTRQL 288