Pairwise Alignments

Query, 301 a.a., transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  205 bits (521), Expect = 1e-57
 Identities = 111/297 (37%), Positives = 172/297 (57%), Gaps = 1/297 (0%)

Query: 3   IEFRHLRTIKAIHQEGGLARAADQLNITQSALSHQIKGLEDQAGVELFLRRSKPMKLSAA 62
           IE RHLRT+ A+ + G LA AA +  +TQSALSHQIK LE +    +F+R+SKP+  +  
Sbjct: 2   IELRHLRTLVALKESGSLAGAAKKRFVTQSALSHQIKELETRINSAIFVRKSKPLSFTQE 61

Query: 63  GLRLLRLADQVLPQVEAMQAEFSALRDGNTGRMYIAIECHACFEWLFPVLEGLRKNWADV 122
           G RLL LA+++LP+V   + +           +++ IECH+CF WL PV+E    ++   
Sbjct: 62  GARLLNLAEEILPKVIETEIDLKNGLGSEARDLFVGIECHSCFRWLMPVIEQFNASFPHT 121

Query: 123 DVDIRPGLAFDALPALQKEEVDLVISSDPEVLPGIEFIELFDYKPVFVASALHPLAEKPH 182
           ++++     FD+L AL++ ++D+V++SDP     I +  LFD++   + +A HPLAE P+
Sbjct: 122 NLELSSRHLFDSLTALKQGQLDVVLTSDPIPDHDIAYQHLFDFEVKLLVAADHPLAELPY 181

Query: 183 IEAEDFRGQTLITYPVDKARLDIFSQLLTPAGVEPAHIRQVELTAVILLLVASNRGISVL 242
           + A   + QTL+TYPV   RLDI+   + PAGV  A   + +LTA++L  +A   G++ L
Sbjct: 182 VTAAQLKDQTLLTYPVPLDRLDIYRHFMEPAGVPVAKQIRCDLTAMLLQRIACKDGVAAL 241

Query: 243 PDWVVREVKYSSDYVTRPLTSKGITRRLYAAIRSEDREKPYMQELIRLAKVEARRLQ 299
           P W + E    S    + L S+G+ R L+ A RS        Q+ + L   E    Q
Sbjct: 242 PSWSINEAHGLSLKAVK-LGSEGLRRPLFGAYRSNGSSARLAQQWLNLVTSEGLERQ 297