Pairwise Alignments

Query, 475 a.a., chromosomal replication initiator protein DnaA from Phaeobacter inhibens DSM 17395

Subject, 457 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  332 bits (852), Expect = 1e-95
 Identities = 182/471 (38%), Positives = 270/471 (57%), Gaps = 20/471 (4%)

Query: 6   WGRLRQRLLKTVGQNNFTTWIEPLEFTCVENGVAIFNVPTNFMGNYVSQNFADLILHELN 65
           W +   RL   +    F+ WI PL+   +E    +   P  F+ ++V   + + I     
Sbjct: 6   WQQCIGRLQDELSAQQFSMWIRPLQAE-MEGDTLVLYAPNRFVLDWVRDKYINSINQFFT 64

Query: 66  MS-GEPVQRLAFRVAANTAARPTAVDAAGAADDLPLDLDDEALTDLPRARTATGHGAAPK 124
              G+   +L F + +  +A+P A   A      P      +    P    +        
Sbjct: 65  EQLGDNAPKLRFDIGSRPSAKPQAPAPAAVKAAAPQPKPGNSFVSQPEPAVSN------- 117

Query: 125 DQGETLQAAPLDPRFTFDSFVVGKPNELAHAAARRVAEGGPVTFNPLVLYGGVGLGKTHL 184
                   + ++P + FD+FV GK N+L  AAA +VAE     +NPL LYGG GLGKTHL
Sbjct: 118 ------HRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHL 171

Query: 185 MHAIAWELTARNPELNVLYLSAEQFMYRFVQALRERKMMDFKHLFRSVDVLMVDDVQFIA 244
           +HA+   +   NP   V+Y+ +E+F+   V+AL+   + +FK  +RSVD L +DD+QF A
Sbjct: 172 LHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFA 231

Query: 245 GKDSTQEEFFHTFNALVDQNKQIIISADRAPGEIKDLEDRVRSRLQCGLVVDLHPTDYEL 304
            KD +QEEFFHTFNAL++ N QII+++DR P EI  +EDR++SR   GL V + P + E 
Sbjct: 232 NKDRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELET 291

Query: 305 RLGILQSKVAQQMQTYPDLRIADGVLEFLAHRISTNVRVLEGALTRLFAFASLVGREIDM 364
           R+ IL  K  +       + + D V  F+A R+ +NVR LEGAL R+ A A+  GR I +
Sbjct: 292 RVAILMRKAQES-----GINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITI 346

Query: 365 ELTQDCLADVLRASERKITVEEIQRKVSEYYNIRMSDIIGPKRLRSYARPRQVAMYLCKQ 424
           +  ++ L D+L   E+ +T++ IQ+ V+EYY I+M+D++  +R RS ARPRQ+AM L K+
Sbjct: 347 DFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKE 406

Query: 425 LTSRSLPEIGRRFGGRDHTTVMHGVRRIEELKTIDGQIAEDVEMLRRSLEA 475
           LT++SLPEIG  FGGRDHTTV+H  R+I +L+     I ED   L R+L +
Sbjct: 407 LTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 457