Pairwise Alignments

Query, 475 a.a., chromosomal replication initiator protein DnaA from Phaeobacter inhibens DSM 17395

Subject, 509 a.a., chromosomal replication initiator protein, DnaA (NCBI) from Rhodospirillum rubrum S1H

 Score =  474 bits (1221), Expect = e-138
 Identities = 256/489 (52%), Positives = 334/489 (68%), Gaps = 24/489 (4%)

Query: 5   NWGRLRQRLLKTVGQNNFTTWIEPLEFTCVENGVAIFNVPTNFMGNYVSQNFADLILHEL 64
           +W R+R  L +  G + + TW+ P+       G     VPT FM ++V  ++ D I    
Sbjct: 27  SWDRVRGFLKREFGDSAYRTWVVPMTLVAAVEGEVRLAVPTRFMRDWVMNHYGDRIRSLW 86

Query: 65  NMSGEPVQRLAFRVAANTAARPTAVD------AAGAADDLPLDLDDEALTDLPRART--- 115
                 ++ + F V +  A  P A        A GA+D        EA    P AR    
Sbjct: 87  AAEDSSIRYVDFIVESAPAPAPPARAGQDADRAEGASDPAAGQRPAEAGAPRPAARASRT 146

Query: 116 ---------ATGHGAAPKDQGETLQAAPLDPRFTFDSFVVGKPNELAHAAARRVAEGGPV 166
                    A G  +AP    + + +APLDPRFTFD+FVVGKPNE A+AAA+RVA+   V
Sbjct: 147 MVRVAAEGGAEGADSAPAPLDDGI-SAPLDPRFTFDNFVVGKPNEFAYAAAKRVADSTGV 205

Query: 167 TFNPLVLYGGVGLGKTHLMHAIAWELTARNPELNVLYLSAEQFMYRFVQALRERKMMDFK 226
            FNPL LYGGVGLGKTHLMHAIA  +   +P   V+YLSAEQFM+RF++ALR++  M FK
Sbjct: 206 AFNPLFLYGGVGLGKTHLMHAIARGIREASPHRRVIYLSAEQFMHRFIRALRQQDTMSFK 265

Query: 227 HLFRSVDVLMVDDVQFIAGKDSTQEEFFHTFNALVDQNKQIIISADRAPGEIKDLEDRVR 286
             FRSV+VLMVDD+QFI+GKDSTQEEFFHTFNALVDQ  QI++SAD++P +++++  R+R
Sbjct: 266 EQFRSVEVLMVDDIQFISGKDSTQEEFFHTFNALVDQGSQIVLSADKSPTDLENIGARLR 325

Query: 287 SRLQCGLVVDLHPTDYELRLGILQSKVAQQMQTYPDLRIADGVLEFLAHRISTNVRVLEG 346
           SR+ CGLV DLHPT YELRLGIL+SK A+ M     + + + VLEF+AH+I++N R +EG
Sbjct: 326 SRMACGLVADLHPTTYELRLGILESK-AEHM----GVSVPEKVLEFIAHKIASNGREVEG 380

Query: 347 ALTRLFAFASLVGREIDMELTQDCLADVLRASERKITVEEIQRKVSEYYNIRMSDIIGPK 406
           AL RL A A LVGR++ +E  QD L D+LR  ++++TV+EIQ+KV+E++ IR++D+   +
Sbjct: 381 ALIRLIAHAQLVGRDLTLETAQDVLHDLLRTYDKRVTVDEIQKKVAEHFKIRLADMHSAR 440

Query: 407 RLRSYARPRQVAMYLCKQLTSRSLPEIGRRFGGRDHTTVMHGVRRIEELKTIDGQIAEDV 466
           R R+ ARPRQVAMYLCKQLTSRSLPEIG+ FGGRDHTTVMH VR++EEL   DG  AEDV
Sbjct: 441 RARAVARPRQVAMYLCKQLTSRSLPEIGKSFGGRDHTTVMHAVRKVEELILADGTFAEDV 500

Query: 467 EMLRRSLEA 475
           E+LRR LEA
Sbjct: 501 ELLRRMLEA 509