Pairwise Alignments

Query, 515 a.a., methylmalonyl-CoA mutase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 657 a.a., methylmalonyl-CoA mutase, large subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  342 bits (877), Expect = 2e-98
 Identities = 204/484 (42%), Positives = 278/484 (57%), Gaps = 13/484 (2%)

Query: 43  RGRLWTMRQYAGFSTAEESNKRYHYLLAQGTTGLSVAFDLPTQIGYDSDHEMADGEVGKV 102
           + R W  R YAG STAE SN  Y   LA+G TGLSVAFDLPTQ GYDSDH ++ GEVGKV
Sbjct: 8   KDRPWLFRTYAGHSTAEASNALYRGNLAKGQTGLSVAFDLPTQTGYDSDHVLSRGEVGKV 67

Query: 103 GVAIDSLKDIEILFDGIQLKDITTSMTINATASILLAMYIALAKKQGADLKQISGTIQND 162
           GV +  L D+  LF  I L  + TSMTINATA  LL++YIA+A++QGAD+ ++ GT+QND
Sbjct: 68  GVPVAHLGDMRALFKDIPLDQMNTSMTINATAPWLLSLYIAVAEEQGADVTKLQGTVQND 127

Query: 163 ILKEYAARGTYIYPPKQSMRLITDIFEFCSKEVPKWNTISISGYHIREAGSTAVQELAFT 222
           I+KEY +RGTYI PPK S+R+ITD+  +  + +PKWN +++  YH++EAG+T  QELAF 
Sbjct: 128 IIKEYLSRGTYICPPKPSLRMITDVAAYTREHLPKWNPMNVCSYHLQEAGATPEQELAFA 187

Query: 223 LANGKTYLKAALDK--GLDINVFAKRLSFFFNCHNNFFEEIAKFRAARRMWAKITKD-LG 279
           LA     L     K           R+SFF N    F  E+ K RA   +W +I +D  G
Sbjct: 188 LATATAVLDDLKGKVPAEHFPAMVGRISFFVNAGIRFVTEMCKMRAFVTLWDEICRDRYG 247

Query: 280 ATDEKAQMLRFHTQTGGSTLTAQQPLNNVIRVSNQAMAAVL---GGTQSLHTNGYDEALS 336
             D K +  R+  Q     LT QQP NNV R+  + +A  L      +++    ++EAL 
Sbjct: 248 VEDPKFRRFRYGVQVNSLGLTEQQPENNVYRILIEMLAVTLSKNARARAVQLPAWNEALG 307

Query: 337 LPTESAAKIALRTQQIIAFESGVTDTVDPLAGSFFVENLTDEVETAAWAYIDRIDAMGGS 396
           LP     + +LR QQI+A E+ + +  D   G+  V+    E+   A A +  ID MGG+
Sbjct: 308 LPRPWDQQWSLRMQQIMALETDLLEFDDLFDGNPAVDRKVAELMEGARAELATIDGMGGA 367

Query: 397 VNAIESDYMQNEIAGASYQYQKEIESGERISVGVNKFTQEE-----EGLTEVFNIDDSIR 451
           V AIE  YM++ +  A+      IE GE + VGVNK+ Q E     +    +  +D ++ 
Sbjct: 368 VAAIE--YMKSRLVEANSDRLGRIEGGETVVVGVNKYQQGEPSPLMDADGGIMVVDPAVE 425

Query: 452 KLQSEKLEILKTTRDNDAVEKALQSLHEAAKGETNLMPLIIDAVEKYATLGEIADVFRGT 511
             Q  +L+  +  RD DA +KAL  L EAA    N+MP  I A +   T GE     R +
Sbjct: 426 ADQIARLQAWRAARDEDAAQKALADLREAALSGANVMPASIAAAKAGVTTGEWGLEIRKS 485

Query: 512 FGVY 515
           FG Y
Sbjct: 486 FGEY 489