Pairwise Alignments

Query, 409 a.a., ABC transporter from Pedobacter sp. GW460-11-11-14-LB5

Subject, 417 a.a., ABC transporter permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  146 bits (368), Expect = 1e-39
 Identities = 123/418 (29%), Positives = 203/418 (48%), Gaps = 24/418 (5%)

Query: 3   YRENIRLALESIKANRLRTMLTALIIAIGLMALVGILTTLDAVKKSMTDAFSSMGANSFT 62
           YR  +  AL  +  ++LRT LT L +  G+ A++ +L+  +  ++       SMG     
Sbjct: 9   YRAGVVQALGEMLHHKLRTALTLLGMIFGVGAVIAMLSVGEGAEREALKMIESMG----- 63

Query: 63  IRNRGTGIRIGNGKRPKPFKAIRYEDAVKFKDSLNTPATVAVSVFASGGSTIK-YG--SL 119
           I+N     R   G+  K  +   +   +  +D  +   T+      S G  +K +G  S+
Sbjct: 64  IKNLVVNARPSEGEALKTVR--EHSIGLSLRDIESAMETLPFIEAYSAGKQVKVFGLFSV 121

Query: 120 KTNPNINVQGIDENGLASQGLNLSQGRNFSVSEIQLGSNVCIVGGEVVEKLFKDSDPLDK 179
           +   +  VQG+  +      L L++GR     + Q    + ++G E    LF   D + +
Sbjct: 122 QGRSDALVQGVTPSYFDLSALKLAEGRLLGDEDEQHFRQLAVLGPEAARSLFPRGDAVGQ 181

Query: 180 LINVGNNRFKIVGILEK--KGSS----MGFSGDR-AVYVPL---LKAKQINANANPSYTI 229
            I + +  F +VG+L++  KG S    +   G+R  V++PL   LK  Q     +   TI
Sbjct: 182 RIKINHQWFTVVGVLDEGEKGKSAIEGVKVGGERNQVFIPLATALKKMQFKPLEDELDTI 241

Query: 230 TVMVPSNEMQENIIGESTALFRNIRKVKVNETNNFEITKSDAIAQTLFENLAFVAIGGVA 289
              +    +  ++  +S     + R    NE +   +  +D +AQ       F  +    
Sbjct: 242 KFALKEG-IDPSLAAKSVEHLLSRRHG--NEQDYDIVVPADLLAQHQRTQQIFNIVMACV 298

Query: 290 IGIITLIGASIGLMNIMLVSVTERTREIGIRKAIGANPKVIRHQFLIEAVVICLMGGALG 349
            GI  L+G  IG+MNIML ++ ERT EIG+ +A+GA  K I  QFLIE++VI   GG +G
Sbjct: 299 AGISLLVGG-IGIMNIMLATILERTSEIGLLRALGATQKDIARQFLIESMVISATGGLIG 357

Query: 350 IFLGIVLGNLISLAMGGAFLIPWLFIIGGFVLCVFVGILSGYYPAKKASKLDPVEALR 407
           I +G++L  +IS A G         I+   ++C+ VGI  G YPAKKA++LDP+ AL+
Sbjct: 358 IGVGLLLALVISAAAGWPVAWSVFAILLSLLVCMAVGIGFGLYPAKKAARLDPIVALQ 415