Pairwise Alignments

Query, 120 a.a., four helix bundle protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 117 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.8 bits (125), Expect = 1e-12
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 6   FEKLETWQKARMLRKDIYNLTRKFPKEEVFGLTSQIKRSSGSVGDCLAEGSARVTPKDKA 65
           FE+L+ W++A  L   IY +T        +G   QI RS  S+   +AEG  R T KD+ 
Sbjct: 3   FEQLDVWKRASRLSCQIYQVTESVSN---WGFKDQITRSGLSIPSNIAEGEERETLKDQI 59

Query: 66  HFITMSYSSAIETINHIIGAYDLGYINEEDYISFRLKLDELTNKLNALRK 115
            F+  +  S  E +  +    ++GY+ +E  +    +  EL   L A+ K
Sbjct: 60  RFLYYAKGSLGELVTQLYIGIEVGYLAKEPALLMVQEAKELAKILGAIIK 109