Pairwise Alignments

Query, 230 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 234 a.a., two-component system response regulator protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  108 bits (269), Expect = 1e-28
 Identities = 62/197 (31%), Positives = 115/197 (58%), Gaps = 3/197 (1%)

Query: 4   IRALIIDDERGARQELARMLKSYPQVTVLGEAANADEAEQLIGLLKPDLIFLDIQMPGRS 63
           I+ +I DDE  AR+ L   ++    +T+ GE  +A +   ++   + DL+FLDI+MP  +
Sbjct: 3   IKCIITDDEPIARKGLRGYIEKVDFLTLTGECEDAVQLNTILKTQEIDLLFLDIEMPEMT 62

Query: 64  GFDLLETLVHVPQVIFVTAFDSYAVQAFEVSAMDYLMKPVREERFKSAIDKAIEKIGANE 123
           G +LL  L + P+VI V+A++ YA++ +E + +DYL+KPV  +RF  +++K  + +   +
Sbjct: 63  GIELLSNLTNPPKVIIVSAYEQYALKGYEFNVVDYLLKPVSFDRFIKSVNKIYDLLQTEQ 122

Query: 124 ---GAAIFVKDRGKHLLIKWKDVHMIESVENYARLFFGQEQVLLKTSLNKLEENPDCERF 180
                 IFVK       I +KD+  IES+ENY  +     + ++ T+L +L ++   + F
Sbjct: 123 KEKNDYIFVKSNKLLKKILFKDILYIESMENYVVIQTVSCKEVVYTTLKQLNDSLPKDVF 182

Query: 181 FRAGRSILFNLDYISSV 197
            +  RS + NL+ ++++
Sbjct: 183 QQTHRSYIVNLEKVTAI 199