Pairwise Alignments

Query, 230 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 242 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  103 bits (256), Expect = 4e-27
 Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 17/212 (8%)

Query: 4   IRALIIDDERGARQELARMLKSYPQVTVLGEAANADEAEQLIGLLKPDLIFLDIQMPGRS 63
           ++ + IDDE  A ++L   +   P ++++    +A EA +++   + DLIF+DI MP  +
Sbjct: 1   MKCIAIDDEPLALKQLTDYISRVPFLSLVKSCQDAFEAMKVLADEEIDLIFVDINMPDLN 60

Query: 64  GFDLLETLVHVPQVIFVTAFDSYAVQAFEVSAMDYLMKPVREERFKSAIDKA-------- 115
           G D + +L+  P V+F TA+  YAV  F++ A+DYL+KP   +    A DKA        
Sbjct: 61  GLDFIRSLISRPMVVFTTAYSEYAVDGFKLDAVDYLLKPFEFQDLLKAADKARKQYEYRM 120

Query: 116 IEKIG------ANEGAAIFVKDRGKHLLIKWKDVHMIESVENYARLFFGQEQ--VLLKTS 167
           +E+ G        +G ++FVK   K + I  K++  IE +  Y R+F   E   V+   S
Sbjct: 121 LEQQGELGNSSQIKGDSLFVKSDYKVVRIDVKNIRYIEGMSEYVRIFIEGEDKPVITLAS 180

Query: 168 LNKLEENPDCERFFRAGRSILFNLDYISSVKK 199
           L K+EE      F R  RS + NL  I+ V +
Sbjct: 181 LQKMEERLP-TYFMRVHRSYIVNLRKITEVSR 211