Pairwise Alignments

Query, 230 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 243 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  110 bits (275), Expect = 2e-29
 Identities = 65/212 (30%), Positives = 113/212 (53%), Gaps = 16/212 (7%)

Query: 4   IRALIIDDERGARQELARMLKSYPQVTVLGEAANADEAEQLIGLLKPDLIFLDIQMPGRS 63
           +  +I+DDE  AR+ +  +++    + ++G   +A  A   +     DL+FLDIQMPG +
Sbjct: 5   MNCIIVDDEPLAREAMKLLIEEAECLQLVGSFNSAATASDFMEQHVVDLVFLDIQMPGIT 64

Query: 64  GFDLLETLVHVPQVIFVTAFDSYAVQAFEVSAMDYLMKPVREERFKSAIDK--------- 114
           G +   T+     VIF TA+  YA+ ++EV A+DYL+KPV  ERF+ A++K         
Sbjct: 65  GIEFARTISKRTLVIFTTAYTEYALDSYEVDAIDYLIKPVEAERFQKAVEKAQSYHSLLL 124

Query: 115 -----AIEKIGANEGAAIFVKDRGKHLLIKWKDVHMIESVENYARLFFGQEQVLLKTSLN 169
                AIE I A E    FVK   ++  + + D+  +E +++Y  L  G+++++ + SL 
Sbjct: 125 QEEKEAIETIVAAE--YFFVKAERRYFKVNFSDILFVEGLKDYVILQLGEQRIITRMSLK 182

Query: 170 KLEENPDCERFFRAGRSILFNLDYISSVKKDD 201
            + +    + F R  +S + N  +I S   +D
Sbjct: 183 AVFDLLPKDSFLRVNKSYIVNTAHIDSFDNND 214