Pairwise Alignments

Query, 381 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 335 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  196 bits (498), Expect = 8e-55
 Identities = 117/352 (33%), Positives = 190/352 (53%), Gaps = 48/352 (13%)

Query: 7   YLDNIKTLKSAILQSRYRAATLVNKELLTLYFAVGKFISVKIKEEKWGAKVIENLSADLQ 66
           Y   ++ + + I  SR + A  +    + LY+ +GK +S +   + +GA+V+E L++DLQ
Sbjct: 8   YKQILQRIVAEIKSSRIQVARKITSATMELYWNIGKELSAQHLSKGYGAQVVEMLASDLQ 67

Query: 67  TELPGLRGFSATGIKRMRLFFELWEEYFIIKPSEIGQSSIIEIEQLEFRPTLLDQIQNAD 126
            E PG  GFS+  +  M+ F+E +           G+S  ++                  
Sbjct: 68  KEFPGTTGFSSRNLWEMKRFYERY----------CGESRKLQ------------------ 99

Query: 127 NEIVKIIPTLLAQIENHFFKLSFSHHVELIQSTKTLEEKIYYIQKTATEFWSLAKLKHHL 186
            + V ++P              + H++ L+   K  EE  +Y  ++    W+   L +++
Sbjct: 100 -QSVAVLP--------------WGHNLLLMSKCKNPEEIYFYATRSTELGWTRDVLLNYI 144

Query: 187 KNKSFSNSGSLP--NNFSKTISNDDIRQKALQTFKDEYLLDFINIEDTDENDERVLESEI 244
           K  +FS     P  +NF +T+  + ++++A +  K  Y L+F+ I  T    E  LE  +
Sbjct: 145 KADAFSTREEQPKLHNFKETLP-ECLQEQAEEMLKSRYNLEFLGI--TKPILELELERRL 201

Query: 245 VHNVKKFLMSLGSDFAFIGNQYRLIVEEEEYFLDLLFFNRRLQCLVVFELKTGKFKPEYM 304
           V  +K FL+ +G  F+FIGNQYRL++E++EYF+D+LFFNR  + L+  ELK G F+PEY+
Sbjct: 202 VDKIKTFLLEMGKGFSFIGNQYRLVLEDKEYFVDMLFFNRCTRSLIALELKIGSFQPEYV 261

Query: 305 GKMNFYLSALDEYIKQPHEQPSIGIILCKEKNNKVVEFSFRDFNKAMGVSTY 356
           GKMNFYL+ LD  +K P E PSIGIILC ++NN  VE + +     +GVS Y
Sbjct: 262 GKMNFYLNLLDRQVKMPDENPSIGIILCADRNNVEVEVALQGSTAPIGVSEY 313