Pairwise Alignments

Query, 381 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 367 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  361 bits (927), Expect = e-104
 Identities = 183/386 (47%), Positives = 258/386 (66%), Gaps = 25/386 (6%)

Query: 1   MEPGKSYLDNIKTLKSAILQSRYRAATLVNKELLTLYFAVGKFISVKIKEEKWGAKVIEN 60
           M+  ++Y + +KT+K AIL+S+YRAAT VNKE L+LY+ +G+++S   +   WG   IE 
Sbjct: 1   MDINQNYREAVKTIKEAILRSQYRAATSVNKEQLSLYYGIGRYVSKNSRIGFWGKGAIEQ 60

Query: 61  LSADLQTELPGLRGFSATGIKRMRLFFELWEEYFIIKPSEIGQSSIIEIEQL--EFRPTL 118
           +S+ LQ ELPGLRGFS + IK MR+F+E WE   ++    +    +++ + L    R  L
Sbjct: 61  ISSLLQKELPGLRGFSTSNIKNMRVFYEEWEP--VLNRQPLAGDLVLDEKLLLSVIRQPL 118

Query: 119 LDQIQNADNEIVKIIPTLLAQIENHFFKLSFSHHVELIQSTKTLEEKIYYIQKTATEFWS 178
            D+   +D                 FF + FSHH E+I   KTLE +++YI + A  +WS
Sbjct: 119 ADEFNWSD-----------------FFSIGFSHHTEIISKAKTLEARLFYIHECAIRYWS 161

Query: 179 LAKLKHHLKNKSFSNSGSLPNNFSKTISNDDIRQKALQTFKDEYLLDFINIEDTDEN--- 235
              L+ +LK   +S+ G+LPNNF++T+ +     KA+ +FKDEYLLDFIN+E+ DE    
Sbjct: 162 KYTLRDYLKADLYSHRGTLPNNFAQTLPDTKQALKAVCSFKDEYLLDFINVEELDEQEED 221

Query: 236 -DERVLESEIVHNVKKFLMSLGSDFAFIGNQYRLIVEEEEYFLDLLFFNRRLQCLVVFEL 294
            DE+++E  IV NVKKF+M+ G DF+FIGNQYR+ V  EE F+DLLFFNR L  LV  EL
Sbjct: 222 LDEKIVEKSIVANVKKFIMTFGQDFSFIGNQYRVEVAGEEMFIDLLFFNRELNSLVAVEL 281

Query: 295 KTGKFKPEYMGKMNFYLSALDEYIKQPHEQPSIGIILCKEKNNKVVEFSFRDFNKAMGVS 354
           K+GKF+  Y+G++N YLSALD Y+++PHE PSIGIILC+E N   VEF+ RD+NK MGV+
Sbjct: 282 KSGKFRSSYLGQLNTYLSALDSYVRKPHENPSIGIILCREMNQTFVEFAVRDYNKPMGVA 341

Query: 355 TYKTSKVLPSAYKGLLPDVETLKKLM 380
           TY+TSK +P   +  LPD+E L+KL+
Sbjct: 342 TYRTSKDMPERLRNALPDIEELRKLL 367