Pairwise Alignments

Query, 549 a.a., gliding motility lipoprotein GldJ from Pedobacter sp. GW460-11-11-14-LB5

Subject, 303 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 18/100 (18%)

Query: 274 LPTEAEWEYAALGLIGNTEYENINQNKIYPWNGLGVSSAKKKTRGMIQANFKRAPGDYMG 333
           LPTE EWE AA G +   E+          W G  ++          Q +F         
Sbjct: 141 LPTETEWELAARGGLDGAEFS---------WGG-ELAPGGNHMANTWQGSFP-------- 182

Query: 334 VGGSLNDKGDLTVPVIQYTPNDFGLYNMAGNVNEWVNDVY 373
           V  S++D    T PV  Y PN +GLY+M GNV EW  D +
Sbjct: 183 VENSMDDGFARTSPVRFYPPNGYGLYDMIGNVWEWTTDYW 222



 Score = 31.6 bits (70), Expect = 4e-05
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 26/111 (23%)

Query: 83  VTVPSFYMDETEVSNTDWLEYLH---WIRYNYPEDREFYYNELPDTLVWRRALSYNEPY- 138
           VTV  F++D T V+N  +LE+++    + +   + R   Y   P + +   +L +  P  
Sbjct: 26  VTVDGFWIDVTPVTNRQFLEFVNATGHVTFAERKPRAEDYPGAPPSNLRAGSLVFTPPKR 85

Query: 139 --------------VDNYLRHPAYR--------DYPVVGVSWEQASRYCEW 167
                         +    RHP  R        D+PVV V++  A  Y EW
Sbjct: 86  PLQGTDISQWWIFTLGANWRHPLGRKSSIGAILDHPVVHVAYSDAKAYAEW 136



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 482 RVYKGGSW---NDMAYWLNPATRRFMQQDESSAEVGFRC 517
           RV KGGS     +      PA R   + D +++ VGFRC
Sbjct: 260 RVLKGGSHLCAPNYCRRYRPAARHAQEIDTTTSHVGFRC 298