Pairwise Alignments

Query, 1233 a.a., methionine synthase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1244 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1493 bits (3864), Expect = 0.0
 Identities = 757/1245 (60%), Positives = 937/1245 (75%), Gaps = 32/1245 (2%)

Query: 3    IREELEKRILVIDGAMGTMIQRYTLTEEDFRGERFKNHPCDVKGNNDLLNITRPDIIKTI 62
            IR +L  RIL++DGAMGTMIQ Y L E D+RGERFK+   DVKGNNDLL +T+P IIK I
Sbjct: 15   IRNQLSTRILILDGAMGTMIQGYKLEEADYRGERFKDWHTDVKGNNDLLVLTQPHIIKQI 74

Query: 63   HLEYLASGADIIETNTFSTQRISMADYQMEDLSYEMSFEGARVAKEAVNEFMAANPDRKC 122
            H +YL +GADIIETNTF+   I+MADY M+ LS E++ EGAR+A+EA +    A    + 
Sbjct: 75   HTDYLLAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLAREACDAIEQATGKPR- 133

Query: 123  FVAGAIGPTNRTLSMSPNVNDPGFRAVYFDELEAAYYEQVRGLVDGGSDVLLIETIFDTL 182
            +VAG +GPTNRT S+SP+VNDPGFR ++FDEL  AY E  R L++GG+D++++ETIFDTL
Sbjct: 134  YVAGVLGPTNRTCSISPDVNDPGFRNIHFDELVTAYCESTRALIEGGADIIMVETIFDTL 193

Query: 183  NAKVAIVAIKK-YEEVIGR----KLEIMISGTITDASGRTLSGQTAEAFLNSVMHAKPLS 237
            NAK A+ AI+  ++E+ G     +L +MISGTITDASGRTL+GQT EAF NS+ H KPLS
Sbjct: 194  NAKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTEAFYNSLRHIKPLS 253

Query: 238  IGFNCALGAKEMRPHIEELAAKAGCYVSAYPNAGLPNEFGAYDEQPHETAHLVDDFIASG 297
            IG NCALG KE+RP++EEL+  A CYVSA+PNAGLPNEFG YDE P + A ++ ++   G
Sbjct: 254  IGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPEDMAKVIQEWAREG 313

Query: 298  FVNIVGGCCGTTPEHIGCIAKNARKAEPRKIPVLEPYMRLSGLEPVTITPESIFVNIGER 357
             +NI+GGCCG+TPEHI  I +   +  PR +P +    RL+GLEP+TI  +++FVN+GER
Sbjct: 314  MLNIIGGCCGSTPEHIKVIREAVEQFAPRVLPEIPVACRLAGLEPLTIDAQTLFVNVGER 373

Query: 358  TNITGSPKFSKLILGGDYEAALAVALQQVEGGAQVIDVNMDEGMLDSEAAMTKFLNLIAS 417
            TN+TGS KF KLI  G +E AL VA +QVE GAQ+ID+NMDEGMLD    M KFLNLIAS
Sbjct: 374  TNVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDGVEIMHKFLNLIAS 433

Query: 418  EPDIAKLPIMVDSSKWSVIENGLKCLQGKGIVNSISLKEGEDKFRESARKIMQYGAAVVV 477
            EPDI+++PIM+DSSKW VIE GLKC+QGKGIVNSISLKEGE+KF E A  + +YGAA ++
Sbjct: 434  EPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFIEQATLVKRYGAAAII 493

Query: 478  MAFDEQGQADNYERRKEICKRSYDILVNEIGFPAEDIIFDPNILTVATGLEEHNNYAVDF 537
            MAFDEQGQAD   R+ EIC R+Y +LV+++GFP EDIIFDPNI  +ATG++EH+NYAVDF
Sbjct: 494  MAFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIATGIDEHDNYAVDF 553

Query: 538  INATRWIKENLPHAKVSGGVSNISFSFRGNNTVREAMHSAFLYHAIQAGLDMGIVNAGML 597
            I+A + IK  LPHA +SGGVSN+SFSFRGNN VREA+H+ FLYHAI+ G+DMGIVNAG L
Sbjct: 554  IDAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIKVGMDMGIVNAGQL 613

Query: 598  EVYQEIPPELLERVEDVLLN-----RRDDATERLVEYADTVKSKGKEVVKDE--EWRKGS 650
             ++ +I PEL  RVE+V+LN        + TE+L+E A+  +  G    K E  EWR   
Sbjct: 614  AIFDDIDPELKVRVENVVLNLPCPVEGSNNTEQLLEIAEKFRGDGSSSAKKEDLEWRSWP 673

Query: 651  VEERLSHSLVKGIVEYLDDDVEEARQKYARPIQVIEGPLMDGMNIVGDLFGAGKMFLPQV 710
            V +RL+H+LVKGI E++D+D E ARQ  +RP+ VIEGPLMDGMNIVGDLFG+GKMFLPQV
Sbjct: 674  VNQRLAHALVKGITEFIDEDTEAARQAASRPLDVIEGPLMDGMNIVGDLFGSGKMFLPQV 733

Query: 711  VKSARVMKKAVAYLLPFIEQEKLDNPDQDQNSSAGRVLMATVKGDVHDIGKNIVGVVLAC 770
            VKSARVMKKAVAYL PFIE+EK+         S G++LM TVK DVHDIGKNIVGVVLAC
Sbjct: 734  VKSARVMKKAVAYLNPFIEKEKV------AGQSNGKILMVTVKSDVHDIGKNIVGVVLAC 787

Query: 771  NNFEIVDMGVMVPAQEIIKKAKEINADIIGLSGLITPSLDEMVHFAKEMEREGFTIPLII 830
            N FE+ D+GVMV  + I++  KE N DIIG+SGLITPSLDEMVH  K   REG TIP II
Sbjct: 788  NGFEVFDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREGLTIPAII 847

Query: 831  GGATTSRIHAAVKVAPNYSGPAIHVLDASRSVTVCSTLMNPETKDEYVAGIRAEYDKARE 890
            GGAT S+IH AVK+AP+Y   AI++ DASR+V + S L+N ET+   +    AEYD  R 
Sbjct: 848  GGATCSKIHTAVKIAPHYPHGAIYIADASRAVPMVSKLVNNETRQATIDETYAEYDDMRT 907

Query: 891  AHLNKRSDKRFKTLEEARENRFKIDFQPNLPV-PEFTGTRVFDNYPLEELVPYIDWTPFF 949
              L++   K   +LE ARENR + D+    P  P   G +VFD+YPL +LV  IDWTPFF
Sbjct: 908  KRLSQAKRKEIVSLEAARENRCQHDWANYSPFKPNVLGRQVFDDYPLTDLVDRIDWTPFF 967

Query: 950  HTWELRGSYPKIFDDKNVGDEAKKLFDDAQTLLKRILDEKLLTARAVIGFWPANTVG-DD 1008
              WEL G YP+I  DK VG EA+KLF D + +LK+I++EK LTA+ VIG +PANTVG DD
Sbjct: 968  RAWELHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPANTVGFDD 1027

Query: 1009 IQLTVDSSQLSNDSKLKTENSQLVTIHTLRQQAEKVDGQPYYALSDFIAPKESGIQDYFG 1068
            I+L  D          +T     +T H LR Q E+V G   + L+DF+APK+SG+ DY G
Sbjct: 1028 IELYTD----------ETRTEVELTTHHLRMQLERV-GNDNFCLADFVAPKDSGVADYMG 1076

Query: 1069 GFAVTAGIGIDELVNEFESNYDDYNSIMAKALADRLAEAFAERMHERVRKEYWGYAQDEN 1128
            GFAVTAG GIDE V  FE+N+DDYN+IM K LADRLAEAFAERMHERVRKE+WGYA DE 
Sbjct: 1077 GFAVTAGHGIDEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQ 1136

Query: 1129 LSNQELIKEEYAGIRPAPGYPACPEHTEKGTLFQLLDAENKIGLHLTESYAMYPTAAVSG 1188
            L N+ LI+E+Y GIRPAPGYPACP+HTEKG L++LL     I L++TESYAM+PTAAVSG
Sbjct: 1137 LDNEALIREKYKGIRPAPGYPACPDHTEKGLLWELLKPNETIDLNITESYAMFPTAAVSG 1196

Query: 1189 FYFAHPDSRYFGLGKITKDQIEDYAIRKNMPVEEVERWLSPNLAY 1233
            +YFAHP SRYFG+  I +DQ+EDYA RK M V E E+WL+P L Y
Sbjct: 1197 WYFAHPKSRYFGVSNIGRDQVEDYAKRKGMTVAETEKWLAPVLDY 1241