Pairwise Alignments

Query, 249 a.a., DNA-binding response regulator from Pedobacter sp. GW460-11-11-14-LB5

Subject, 236 a.a., putative two-component response-regulatory protein YehT (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.3 bits (238), Expect = 5e-25
 Identities = 59/218 (27%), Positives = 111/218 (50%), Gaps = 19/218 (8%)

Query: 3   LNCIVVDDEPLALDILQDYISKVPFLTMVKRCENPIEALQIVQGGGIDLVFLDIQMPELT 62
           ++CI+VDDEP A + L + + + P + +V +  N IEA+Q +      L+FLDIQMP ++
Sbjct: 2   ISCILVDDEPFAREALAELLVRHPDVNIVAQASNAIEAIQAINQHKPALLFLDIQMPRIS 61

Query: 63  GIQFLKIAGSKC--HYILTTAYPQYALESYDLNVSDYLLKPIAFDRFYKAVEKVHNQVKP 120
           G++ L +         +  TA+ +YA+++++L+  DYLLKPI   R    +++V    +P
Sbjct: 62  GMELLAMLDKDTMPRVVFVTAFDEYAIKAFELHAFDYLLKPIDDARLANTMDRVRKDQRP 121

Query: 121 VEAPASVAQPIVTPAPFSGSPNPVQDYIFVKTEHKIQKIYLHNILFIEGLKDYISIFTKD 180
            +  +   + +     FSG              ++++ + +  + ++      I + T +
Sbjct: 122 QDVTSLAPERLAHLPCFSG--------------NRLKVVPIEEVEYVFSDVGGIHVSTAN 167

Query: 181 ERVITLQSMKKMEEALPQGQFIRVHKSYIVAVDKIESI 218
            RV T  ++K +EE  P    I  H+ Y++A   I  I
Sbjct: 168 GRVHTQMTLKLLEEKTP---LIFCHRQYLIAPAAIAEI 202