Pairwise Alignments

Query, 660 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 538 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  114 bits (285), Expect = 1e-29
 Identities = 88/301 (29%), Positives = 139/301 (46%), Gaps = 40/301 (13%)

Query: 3   FAHYLLQVNLYLIVFFGFYKLLLDKETYFTLNRIYLVAAGVLSLCIPFIRLEWLTEQKAA 62
           F  Y+L+  L L VF+ FY+  L KET+   NR+ L+   +++  IP +++         
Sbjct: 5   FLIYMLKTALCLSVFYLFYRFWLSKETFHRFNRMVLIGLILVAFVIPSLKVSQNFHLPQI 64

Query: 63  QQVYTSVNWEAV----------LAQATIVTEHN---------TGFNWGNAFVYIYCAGIL 103
           +QV+  +N              + Q T  T H          T    GN   ++Y  G L
Sbjct: 65  EQVFERLNIPEEETEQEHDLQKMEQVTTTTLHTQLEKERSDCTILTLGN-LGFLYLGGAL 123

Query: 104 FFLGRLVFNLFAVKKLINVNKAGSAFSFFGKKVIDQE------------LPQMDV----- 146
             L R +F++  + +LI  N     +    + V+ Q+            L + D+     
Sbjct: 124 LLLLRYIFSIACIYRLIR-NSEKKCWKGKIRLVVHQQNVAPFSWRHYIVLSRQDLEEYGE 182

Query: 147 -IDIHEEAHIKQWHTADILFFEIIGIITWLNPVIYLYKKAIKNIHEFLADELAAEFQGDK 205
            I  HE AHI   H  D+L  EI  +  W NP ++L++K +K +HEF ADE   +   D 
Sbjct: 183 EIIAHEYAHIMHKHFRDLLLAEICLLFQWFNPAMWLFRKELKTVHEFEADESVLKAGIDA 242

Query: 206 AEYAMLLLSKSFGISPNTLTNGFLDKSLIKKRIFMLHKERSKKIAIMKYGIFIPLFALLI 265
            +Y +LL+ K+ G    ++ N F D S +KKRI M+ K++S    + KY I  PL A+  
Sbjct: 243 KKYQLLLIQKTVGTRLYSMVNSF-DHSSLKKRITMMLKKKSNPWKLSKYLIVFPLAAITA 301

Query: 266 V 266
           V
Sbjct: 302 V 302