Pairwise Alignments

Query, 1058 a.a., hydrophobe/amphiphile efflux-1 family RND transporter from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1070 a.a., multidrug resistance protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  744 bits (1921), Expect = 0.0
 Identities = 400/1036 (38%), Positives = 631/1036 (60%), Gaps = 24/1036 (2%)

Query: 1    MFKKFIDRPVLSTVISIIIVILGVLGLVTLPISQYPEIAPPTVQVSASYQGANADVVMSS 60
            M + FIDRPV + VI+III++ G L +++LP+SQYP+IAP +V +SASY GA+A  V  +
Sbjct: 1    MARFFIDRPVFAWVIAIIIMLAGALSILSLPVSQYPKIAPTSVNISASYPGASAKTVEDT 60

Query: 61   VVVPLEEQINGVEDMTYMTSSASNDGTATITVNFKLGTNADLAAVNVQNRVARATSLLPA 120
            V   +E+++ G++ + YM+S++   G  +IT+ F   T+ D+A V VQN++A AT +LP 
Sbjct: 61   VTQVIEQKMKGIDSLRYMSSTSDATGQVSITLTFDASTDPDIAQVQVQNKLALATPMLPE 120

Query: 121  EVTRSGVITAKRQASNLLIFAIYSDDPSYDQKFLQNYANINIIPEIKRISGVGDASAFGT 180
             V R G+   K  +S L+I A+ SDDPS   + L +YA   ++  I R+ GVG+   FG 
Sbjct: 121  AVQRQGITVNKSTSSFLMIIALASDDPSLTGRDLSDYAATYLLDPISRVDGVGETQLFGA 180

Query: 181  LDYTMRIWLKPEVMAVYGLVPNDVSVALAEQNIEAAPGQFGEQG---NQAFQYTLKYSGR 237
              Y MR+WL P  +  Y + P DV  A+  QN + + GQ G       Q   +T+     
Sbjct: 181  -QYAMRVWLDPHKLMNYRMTPADVRSAITAQNTQISVGQIGGTPAVPGQGMSFTILSQSL 239

Query: 238  LKSETEFSNIIIKADANGQILRLKDVARIELGAQSYASYVKFNGKPALGIAISQTAGSNA 297
            L++  +F  I+++ + +G  +RL DVAR+ELG+++Y +   FNGKP+ GIAI    G+NA
Sbjct: 240  LQTREQFERIVLRVEQDGSTVRLADVARVELGSENYDAVSHFNGKPSTGIAIKLATGANA 299

Query: 298  KEVIENSIKTLDKAATSFPKGVHYETVVNVNNFLDASIEKVIHTLIEAFILVFLVVFIFL 357
             + ++    T++  A + P+G+      +   F+  SIE+V+ TL EA +LVFLV+++FL
Sbjct: 300  LDTVKRVRTTMEGLAKNLPEGIRCVFPYDTTPFVRVSIEEVVKTLAEAIVLVFLVMYLFL 359

Query: 358  QDFRSTLIPAISVPVAIIGTFFFLSLFGFTINLLTLFALVLAIGIVVDDAIVVVEAVHAK 417
            Q+ R+T+IP I+VPV ++GTF  L+ FGF+IN+LT+F +VLAIG++VDDAIVVVE V   
Sbjct: 360  QNIRATIIPTIAVPVVLLGTFGALAAFGFSINMLTMFGVVLAIGLLVDDAIVVVENVERI 419

Query: 418  LDAGYKDPKKATKDAMDDISGAIISITLVMAAVFIPVSFIQGSSGVFYKQFGLTLAIAII 477
            +      P++AT+ +M +I+GA++ I LV++AVFIP++FI+GSSGV Y+QF LT+  A+ 
Sbjct: 420  MTEEGLPPREATRKSMGEITGALVGIALVLSAVFIPMAFIKGSSGVIYRQFSLTIVSAMT 479

Query: 478  LSAINALTLSPALCAMFLKP-HAEDHEKSKNFLQRFYTAFNTSFDAVTQKYKRSV-GFLG 535
            LS + AL L+PALCA FLKP H  +H+        F+  FN  FD  ++ Y++ V G  G
Sbjct: 480  LSVVVALVLTPALCATFLKPLHKHEHQAQGG----FFGWFNRMFDRTSRGYRKQVTGVTG 535

Query: 536  KKRWLAGLGIAVFAVVL---VWIMNTTPKGFVPNEDLGTVFSDISLPPSTSQEETDKIIV 592
            +     G  + ++A++L    ++    P  F+P ED G +FS + LP  + QE+T +++ 
Sbjct: 536  R----VGRTMCIYALLLAGTAFLFMRLPTSFLPEEDQGVIFSLVQLPTGSPQEKTLEVLK 591

Query: 593  KIND--IVSKVPEVEATFRVVGRSLISGSGSSYGMVIARLKPWDQRKRD---VKAIIGEL 647
            K+    +V +   V + F V G S  +G G + G+   +LKPWD+RK +     A+ G  
Sbjct: 592  KLEHHYLVDEKETVNSLFTVAGFS-FAGRGQNAGLAFVQLKPWDERKGEGMSAAAVAGRA 650

Query: 648  FAKAAGIKGAKVIFFAPPTIQGFGTGGGFEFQLQDKTGGDIKKFNEVGNAFLGALSKRPE 707
                + I+ + V  F PP +Q  G   GF   LQD+ G   +   +  N  LG  ++ P 
Sbjct: 651  MRAFSRIRNSVVYAFTPPAVQELGNASGFNLFLQDREGVGHEALMQARNQLLGMAAQNPA 710

Query: 708  IQYASTSFNPNFPQYQIDVNVAKVKQAGLTVSDVLGVLQGYYGGVYASNFNKFGKQYRVM 767
            I     +   + PQ++IDV+ AK    GLT++DV GVL    GG Y ++F   G+  +V 
Sbjct: 711  IAVLRPNGMEDTPQFRIDVDAAKAGAHGLTMADVNGVLSTALGGAYVNDFIDRGRVKKVY 770

Query: 768  YQADAKYRANQQSLTNIYVRNSSGTMAPISEFITLEKVYGPQAISRFNLYTSIAVTGNPN 827
             Q DA +R   + +   +VRN+ G M P S F T    YG   + R+N   ++ + G+  
Sbjct: 771  LQGDAPFRMMPEDINAWHVRNAQGNMVPFSAFSTASWTYGSPRLERYNGLPAVELVGSAA 830

Query: 828  AGFSSGDAIKAIQEEAAIHLPTGYGYEFSGLSREEVSSGSQTIFIFLLCVIFVYFLLSAQ 887
             G S+G+A++A+++ AA  LP G G  ++GLS +E  SGSQ   ++ + ++ V+  L+A 
Sbjct: 831  PGKSTGEAMQAVEDMAA-KLPPGVGISWTGLSYQERMSGSQAPALYAISILVVFLCLAAL 889

Query: 888  YESYILPLAVLFSLPIGLAGVFIFDKIFGVDNNIYTQITLIMLVGLLAKNAILIVEYAVD 947
            YES+ +P AV+  +P+G+ G  +     G++N+++ Q+ L+  +GL AKNAILIVE+A+ 
Sbjct: 890  YESWSVPTAVILVVPLGIIGALMATLGRGLNNDVFFQVGLLTTIGLAAKNAILIVEFAMH 949

Query: 948  RRRKGMSIVNSAIDGATARLRPILMTSFAFILGLLPLMLSSGVGAAGNTSIGTGAVGGML 1007
              + G  ++++  + A  RLRPILMTS AF+LG+LP+ +S+G G+    +IGTG +GGM 
Sbjct: 950  LVKSGRPLLDATAEAARLRLRPILMTSLAFLLGVLPMAISTGAGSGSQRAIGTGVMGGMF 1009

Query: 1008 IGTIFGVFVIPALFIV 1023
              T+  V+ +P  F++
Sbjct: 1010 SATVLAVYFVPVFFVM 1025