Pairwise Alignments

Query, 300 a.a., permease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 293 a.a., rarD protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 84.0 bits (206), Expect = 4e-21
 Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 15/292 (5%)

Query: 7   KYFIAGIVPYIIWGTMSVPLRNIKGFPPHEILYYRIFISIIVVWATILLFRRKALQNDLN 66
           K  +  I  Y +WG   +  + ++     +IL +R      V+W+ +             
Sbjct: 9   KGILLAIGAYTMWGFAPLYFKLLEQISATDILLHR------VIWSFVFTALLMVFIGGFG 62

Query: 67  LLKSLNTRQKTRLLLLTIVSSFLITGNWFTYIYAVNSVSLKAAAFAYMVCPLLTALCGFI 126
            L+ L    K  L+LL  V+S LI GNW  +I+AVN+  +  A+  Y + PLL  L G +
Sbjct: 63  KLRQLLKAPKQLLVLL--VTSVLIAGNWLLFIWAVNNDHMLDASLGYYINPLLNVLLGMV 120

Query: 127 ILKEQLTKAKIIALIIAFISII--LLATGSLHEVMWAIIIASFYALYVIVLKVIKDVDKF 184
            L E+L   +  A+ +A + +   +++ GS+  V  ++ +A  + +Y ++ K +K   K 
Sbjct: 121 FLGERLRPLQWFAVFLATVGVTVQVISFGSIPVV--SLALAGSFGIYGLLRKKVKVDAKT 178

Query: 185 NFLGVQLILS--GLMMLPLYFLNAAPFPTETFFWAHIFLIAI-VFTIIPLFLNSYALLGM 241
             L    IL    L  L L   +A        +  ++ L+A  + T  PL   + A + +
Sbjct: 179 GLLVETAILMPVALGYLVLTLGSAEHSMLSNDWQLNLLLVAAGIVTTAPLLCFAGAAVRI 238

Query: 242 PSSALGILIYLNPIVAFTVAFFYFKEKIDLHQLFAYLLLLLSIVIFNAALLK 293
           P S LG   Y+ P + F +A   + E   + +   +  +  ++ +F   +L+
Sbjct: 239 PLSMLGFFQYIGPSIMFILAVSLYGEPFGVEKSITFGFIWTALAVFTLDMLR 290