Pairwise Alignments

Query, 300 a.a., permease from Pedobacter sp. GW460-11-11-14-LB5

Subject, 304 a.a., RarD protein, DMT superfamily transporter (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 92.4 bits (228), Expect = 1e-23
 Identities = 72/284 (25%), Positives = 142/284 (50%), Gaps = 19/284 (6%)

Query: 18  IWGTMSVPLRNIKGFPPHEILYYRIFISIIVVWATILLFRRKALQNDLNLLKSLNTRQKT 77
           +WG + +  + ++  P  EIL +RI  S++ +   +LL  R         L  +     +
Sbjct: 23  LWGLLPLYWKLVQQVPSSEILCHRIVWSVMFLLPLVLLGGR---------LAEVRAALAS 73

Query: 78  RLLLLTIV-SSFLITGNWFTYIYAVNSVSLKAAAFAYMVCPLLTALCGFIILKEQLTKAK 136
           R  L TI  SS LI GNWF YI+AVNS  +   +  Y + PL+ AL G ++L E+ ++ +
Sbjct: 74  RRSLATIAGSSLLIGGNWFLYIWAVNSDMVLETSLGYYMTPLVNALLGALVLGERPSRVQ 133

Query: 137 IIALIIAFISII--LLATGSLHEVMWAIIIASFYALYVIVLKVIKDVDKFNFLGVQLILS 194
           + A++IA   ++  L++ G L  V  A+++A  ++ Y ++ K++K V+    L ++ +L 
Sbjct: 134 LAAIVIAAAGVLSMLVSYGRLPWV--ALVLAVSFSFYGLLRKLVK-VESIPGLFIETMLL 190

Query: 195 GLMMLP----LYFLNAAPFPTETFFWAHIFLIAIVFTIIPLFLNSYALLGMPSSALGILI 250
             + +     L +        +      + + A + T  PL   ++A   +  + LG++ 
Sbjct: 191 APVAVGYLGWLAWQGGGALGHQGLATDLVLVGAGIATSTPLLCFAFAARRLRLTTLGVMQ 250

Query: 251 YLNPIVAFTVAFFYFKEKIDLHQLFAYLLLLLSIVIFNAALLKS 294
           Y+ P +AF +  F F+E +    L  +  +  ++ ++ A  L++
Sbjct: 251 YIAPSIAFLLGAFVFREPVTSAHLLTFGCIWTALALYTAEGLRA 294