Pairwise Alignments

Query, 247 a.a., DNA-binding response regulator from Pedobacter sp. GW460-11-11-14-LB5

Subject, 257 a.a., DNA-binding response regulator LytR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 92.8 bits (229), Expect = 6e-24
 Identities = 83/262 (31%), Positives = 130/262 (49%), Gaps = 24/262 (9%)

Query: 1   MRAILVDDETANLENLKILLAKHCPNIKVVAIASTIDDAFSEVNLHHPDLLFLDIQMGKT 60
           +RA++VDDE    + L  LL+ H  +++ +  AS   +A S +  HHPDL+F DI+M   
Sbjct: 3   IRALVVDDERPARDELVYLLSAHA-DVETMEAASA-GEALSLIASHHPDLVFQDIEMPGR 60

Query: 61  TGFDLLNRLTAKTFE--VVFVTAYDNYGIQAVKFAALDYLLKPVDPDELKAAVEKAEIRT 118
            GFD+L   +  T     VFVTA+D + I+A    A DYLLKPV P+ L   +E+   R 
Sbjct: 61  GGFDVLQAASLMTNPPVFVFVTAFDQHAIRAFDENAADYLLKPVAPERLARCLERVRQRL 120

Query: 119 KSKIHSEQ----LNFLLSQIKKKEPGVPKIALPQQHEIRYVSVDDIVRCVADN------T 168
                S Q    ++ LL++I ++ P +P+IA+ Q   I  V   ++V   A+       T
Sbjct: 121 APDGGSTQVEDMMDRLLARIGRERP-LPRIAVEQGGRIHLVPTPEVVLIEAEEKRIAVVT 179

Query: 169 YTFFFLANGDRILISKPLKEYSDLLKPHGFVRAHQSHLVNPRFVKSWLKEDGGT--LLMD 226
               F  +G     ++ L    D L    F RA+++ LVN   V  +     G   L+M+
Sbjct: 180 EAGRFTCHG-----AQSLARIEDRLAGQPFFRANRAVLVNLERVAEFSPWYNGKYHLVMN 234

Query: 227 SGDK--IPVSKPNREMVKEMLG 246
             ++  + VS+      K+ LG
Sbjct: 235 DSERTGVTVSRNRVRDFKQALG 256