Pairwise Alignments

Query, 1243 a.a., two-component sensor histidine kinase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 372 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  107 bits (267), Expect = 2e-27
 Identities = 86/313 (27%), Positives = 149/313 (47%), Gaps = 23/313 (7%)

Query: 941  SNLINLYALVFVAIGVLAVFLANQITNPLTFIQDSISKTKIGQKNEPIIWRRHDEIGSLI 1000
            ++ + L  LV    G+LAV +  Q+  P+  +     +      NE  +  R   +  L+
Sbjct: 61   TDALGLMLLVLFLAGLLAVVVFRQVLGPIRRLALEGLEDADAYGNEVEVLDRR--LRHLL 118

Query: 1001 KEYNHMIAALEDSAIKLARSERESAWREMAKQVAHEIKNPLTPLKLGVQLLEKSWK---- 1056
               +     LE+S   L ++E+ +   ++A  VAH I+NPLT +KL +  LE+S K    
Sbjct: 119  DTMHRTQVQLEESHETLRQTEKLALVGKLAAGVAHSIRNPLTSVKLRLFALERSLKLGPD 178

Query: 1057 --EKDPNFELKFNKFSKSFIEQIDSLSKIASEFSNFAKMPDTNLERLSLLPIIDQAREVF 1114
              E+  +FE+           +I  L  I + F  F++ P   ++ +S   ++D   ++ 
Sbjct: 179  QKEQQEDFEV--------IAAEIRHLDAIVTNFLEFSRRPRLRMQPVSPSDVVDMTLQLL 230

Query: 1115 K---STENVTIDVLNKSDKDIEIMADHDQLLRTFNNLLKNAIEAIDEETLCCITI---IV 1168
            K    + NV + V +++++   +  D +QL     NL+ NA EA+  +    IT    I+
Sbjct: 231  KHRLESFNVAVAV-HRAERLPVVDGDAEQLKEALVNLILNACEAMGYDGTLDITEEKGII 289

Query: 1169 YVDAKNAYIEIKDNGKGIPPTLHDKIFVPNFTTKTSGTGLGLAFVKQAVENAGGSVKFTS 1228
                +   I I D+G G+P  + +++F P F+TK  GTGLGL   ++  E  GG +   S
Sbjct: 290  NPLGRAVVIRIADSGPGVPQHIREEVFQPFFSTKEEGTGLGLPIARRIFEEHGGWLHLHS 349

Query: 1229 ISGLGTTFYLNFP 1241
              G G TF +  P
Sbjct: 350  AHGKGATFVIVLP 362