Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 179 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 48.5 bits (114), Expect = 6e-11
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 16/128 (12%)

Query: 34  AEDILQDVWFQLSN------QPEAG---AIEQISGWLYRVARNKITDKYRKQKEESLEDF 84
           AED++Q+ W +  +        EAG   A+E+  G+LY++ RN   D  R+ K E+    
Sbjct: 32  AEDVVQEAWLRFDSASPSPTSTEAGRGTALERPVGYLYKIVRNLAVDLSRRLKREAWMGD 91

Query: 85  TFEGEDGEINFKEILLAEAYSPEEESLKKLFWDQLFLALEELPENQRYVFVQNELEERTF 144
                DG       + A A SPE+E++ +     +  AL  LP   R  F  +  E  TF
Sbjct: 92  GGASLDG-------VAAGAPSPEQEAIGRDDLRAVAQALASLPPRTRTAFDLHRFENCTF 144

Query: 145 QELADESG 152
            E+    G
Sbjct: 145 AEIGQRLG 152