Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma factor from Pedobacter sp. GW460-11-11-14-LB5

Subject, 181 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 45/160 (28%), Positives = 80/160 (50%), Gaps = 8/160 (5%)

Query: 19  RLFSFIRGRVN--TDEDAEDILQDVWFQLSNQPEAGA-IEQISGWLYRVARNKITDKYRK 75
           R   ++R ++     E+AED++ D+  +L  + +    +E ++ +LYR   N I D +R+
Sbjct: 22  RFVRYVRAKLGGAAAEEAEDVVSDLVLRLVERADLPEQVETMTAYLYRALGNAIIDLFRR 81

Query: 76  QKEESLEDFTFEGEDGEINFKEILLAEAYSPEEESLKKLFWDQLFLALEELPENQRYVFV 135
           ++     +  FE  D  +        EA     E+L ++ W     ALE L   +R V++
Sbjct: 82  RRSRPAAERDFESADAGVLVDPAPNPEAQVLTREALARIGW-----ALERLSPGERAVWI 136

Query: 136 QNELEERTFQELADESGENIKTLISRKGYAVKHLRNRLQN 175
             E+E  TF+ L++  G+ I TL++RK  A   LR  L +
Sbjct: 137 AVEVEGWTFRALSEAWGQPIGTLLARKSRATTALRRLLSD 176