Pairwise Alignments

Query, 359 a.a., secretion protein HlyD from Pedobacter sp. GW460-11-11-14-LB5

Subject, 443 a.a., secretion protein HlyD family protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  210 bits (534), Expect = 7e-59
 Identities = 134/369 (36%), Positives = 206/369 (55%), Gaps = 26/369 (7%)

Query: 15  ILGVLL-VIGIIFGITEWNYYSKHVDTDDAQIDGDISPVVARVGGYVKDINFEENTHVTE 73
           ILG+LL V+ +  GI  W+   K V+TDDAQ+DG I  V  RV GYV D+  E+N  V E
Sbjct: 14  ILGILLGVMVLAAGIWYWHGLGK-VETDDAQVDGRIFMVSPRVAGYVVDVPVEDNQFVKE 72

Query: 74  GQILVKLDDNDYKVKLEQAQSGQKGASAGVGVAESQIV-----------ATQANTGTAKA 122
           G++L +LD  +Y+V + +A++       GV +  SQ V           AT+     A+ 
Sbjct: 73  GEVLARLDPTEYEVAVAEARAQLAALQRGVPLELSQTVHRVTGAQAVEEATKRRAAQARD 132

Query: 123 NVDAAKSNVQAANVKVNLAQKDYNRYENLVKDGSITQQAFDQAKANKESAEAARQS---- 178
             DAA+  ++  + +   A  D  R E+LV  G+++++A D+A++  ++A+A  +S    
Sbjct: 133 EEDAARYEMERLSTEQAQAALDRRRLESLVGQGAVSREAADRARSTDDAAKARLESSRAK 192

Query: 179 ------ALAAYRAAQDQYNAAVKQVGTTQSQLAVSSNVISQRQSDIDFAKLQLSYTDIKA 232
                 A AA  A   +  A V   GT Q    + +  +  +Q+ +  A+L L +T ++A
Sbjct: 193 LEAASKARAAAEAEMRRVRAEVDLAGTGQVVAEIRARQVEAQQAKVRQAELNLEWTTVRA 252

Query: 233 PATGIVSKKNVQKGQLVQAGQSLFSIV--NDGSIYVTANFKETQLEKIKEGSKVEIEVDA 290
           P  G V+KKNV+ G++V  GQ + ++V  +   ++VTANFKET+L  +K G   EI VD 
Sbjct: 253 PVDGYVTKKNVEPGRMVTRGQPIMAVVPMSPDHLWVTANFKETELTDVKPGQPCEIRVDT 312

Query: 291 YPDEKIHGEVYNFSPITGAKGSLLPPDNATGNFVKVVQRVPVKIKIHP-SKELLAKLRPG 349
           YP+  + G V +    TGA  SL PP NA+GNFVKVVQR+PV++++       +  LR G
Sbjct: 313 YPNLVLKGLVESIMAGTGAAFSLFPPQNASGNFVKVVQRIPVRLRLTDYDPATMPPLRVG 372

Query: 350 MSVKASVST 358
           MSV   + T
Sbjct: 373 MSVVPVIFT 381