Pairwise Alignments

Query, 977 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1338 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  188 bits (477), Expect = 2e-51
 Identities = 232/982 (23%), Positives = 415/982 (42%), Gaps = 108/982 (10%)

Query: 14  IKINFIVSFILLFSLKLSAQS----YNFTNYSLKDGLPQSQVMVIFQAKDRTLWLGTFGG 69
           +K N I    L+  L   AQ+    Y F + S ++GL Q+ V  I Q     +W GT  G
Sbjct: 1   MKKNIITFVALIIGLICRAQTVDENYYFKSLSSQNGLSQNTVSAILQDSKGFMWFGTKDG 60

Query: 70  VSNFDGRQFTSY----SKADGLGSNSVNCIAEDNQGQVFFGTETGISILKRGKIS----- 120
           +  +DG  F  +    +    LG+N V  + ED +G ++ GT+ G+ I    K +     
Sbjct: 61  LDRYDGVSFRHFKYDRTNPRSLGNNFVTSLYEDVEGNIWIGTDVGVYIYYPEKDTFRHFV 120

Query: 121 -----TLFSGKGVSHLLKDKEGVIWGISE-HKLF------KIVKDKIIS-YSIAGKNIHT 167
                     + V+ +  D++G IW  SE   LF      + +++ I++ +S+   N+  
Sbjct: 121 ELSDRNTRIERAVAMISGDRQGRIWIASEAQNLFCYDLKEQSLRNYILTEHSLVSTNVKC 180

Query: 168 INSDSSGNLYAVVSGSGIYQLKNNNWAIYQELPPAINTLSIRKILFDKTVK---NKIYLL 224
           +  D+SG ++    G G++  K+N   ++  L P  N  +    +  K V    N +Y+ 
Sbjct: 181 LTVDNSGTIWIGFYGDGLFYSKDNLKTLHPYLSPVDNEETYNDDVVSKIVLGAYNCLYIS 240

Query: 225 TYRSGIYVLE--NGIVKPFF-KKAGIDTYY--SIAQDHRGNMWVGSEKGAYFIN-KTGAV 278
           + + G+  L   +G ++    K    +  Y  ++       +W+G+E G Y  N +T   
Sbjct: 241 SLKGGVKELNLTSGKLRDLLLKDENNEAIYCRTLLVYTDNELWIGTESGVYIYNLRTEKY 300

Query: 279 INFNGEN----GLSDNQVNEIFSDAENNIWISCFSDGIYKYEGDAFIRYNRFKGKNLAYP 334
            +          LSDN +     D E+ IWI  +  G+  Y   ++  + ++  K +   
Sbjct: 301 THLRSSEYDPYSLSDNAIYSFCKDREDGIWIGSYFGGV-NYYPRSYTYFEKYYPKGIENS 359

Query: 335 ISG-----IAADKNDNLWFGTFNKGVFKYDGKDVQ-NVDIPAFKDKKIYFVYADRAKNVW 388
           + G        D    LW GT + G+ +++ K    +   P+     I+ +     K +W
Sbjct: 360 LHGKRVREFCRDSQGILWIGTEDGGLNRFNLKTKDFSFFAPSAGFTNIHGLCLVDDK-LW 418

Query: 389 FSTYGQGIWKYNGQKFSQVLKPER--------FDNS--AIAEDEEGGIWINGLMWTT-YL 437
             T+ +G+ K    +   VLK  +         DNS  AI +   G I++  +     Y 
Sbjct: 419 VGTFSKGL-KVIDTRSGVVLKTYQKNDSPRSLIDNSIFAICKTATGDIYLGTMFGLVRYN 477

Query: 438 KDGKT-ERISGFDGYLSCIYPLTKDS---VFLGT-SNGI-----------TLIKNKKIDK 481
           K     +RI   +G    IY + +DS   ++L T +NG+             + + K + 
Sbjct: 478 KQSDDFDRIPELNGKF--IYDIKEDSAGNIWLATYANGVYCYNVNDRKWKNYVHDDKDNT 535

Query: 482 TFHIKSLSNVYVLSIIKHHDNLIFATLGDGIITWNLKTKAIKRYVVANGLNSNDIYSLAT 541
           +     +S+V+  S    H  +   T G G   ++ +++    Y   NGL S+ +Y +  
Sbjct: 536 SLPYNKVSSVFEDS----HRQIWLTTQGGGFCIFHPESETFTSYNSTNGLPSDVVYQIVE 591

Query: 542 DKKNNLWAGTGRGINKLTFNKQQQSYEVFRDHPLIVECNQNAIINYKNS-ILVGTINGLI 600
           DK+  LW  T  G+     N +        +  L  + N  +    +N  I  G I+G I
Sbjct: 592 DKEGQLWLTTNNGLVCFQPNTEAMKVYTTANGLLGDQFNYRSSFEDENGMIYFGGIDGFI 651

Query: 601 QCKTNPTTENKKNPFIHIQQVSVFHKNDRAKDISIDLSK---IGHKFYKLNYSQNHISIS 657
                  +ENK  P + I    +F+K   A + +  L K      K   L   QN  S  
Sbjct: 652 AFNPKDFSENKNLPTVVITDFLLFNKEVYADEPNSPLEKSITFSDKIV-LRADQNSFSFR 710

Query: 658 FKGVYLTNPESVLYRYKLVGVDNDFSKPVPNTEIEYSAIRPGSYTFQVYAI-ANG-QQSN 715
              +    P     +YKL G D+++     +  I YS +R G Y F+V A  +NG   SN
Sbjct: 711 ISALGYQAPRMNKLKYKLEGFDDEWLSVGESPLITYSNLRYGHYIFRVKAANSNGVWNSN 770

Query: 716 IEQFSFTIVPPYYDTV-IFKIIAFLVLIFLIWLIFYLIFKTRERKKHQFEKLKLKEQEKI 774
               S  I+PP+Y +V  + I   L++   ++L+ Y   +T  + + Q EK + +++ ++
Sbjct: 771 EISLSIQILPPFYLSVWAYCIYVLLIIGCSVYLVLYFKRRTNRKHRRQMEKFEQEKEREV 830

Query: 775 RKQTAEDFHD---DIGNKLTRIN-VLSEILDKKVSGAEKEQKELIRLIRENAGLLYTGTK 830
                + F +   +I   LT IN  L  IL KK    + E +E + ++++N   L + T 
Sbjct: 831 YNAKIDFFTNVAHEIRTPLTLINGPLENILLKK--SVDSETREDLNIMKQNTERLLSLTN 888

Query: 831 DIL---------WALDPHSDNLFEILMHIKNFGVDLFQNTGVTFKMEGVLSKYQKLHLSM 881
            +L         + L+    N+ E+L         L +   + F +   +  +   H++ 
Sbjct: 889 QLLDFRKTESQGFRLNFAECNITEVLKETHKRFTSLAKQRELDFILNVPVQDFY-AHVNK 947

Query: 882 EFNRNLTLIFKEMLNNVLKHAK 903
           E     T I   +LNN +K+A+
Sbjct: 948 E---AFTKIVSNLLNNAVKYAE 966