Pairwise Alignments

Query, 1126 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1053 a.a., TonB-dependent receptor for chondroitin sulfate and hyaluronic acid (susC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  314 bits (804), Expect = 3e-89
 Identities = 279/1068 (26%), Positives = 450/1068 (42%), Gaps = 154/1068 (14%)

Query: 127  QIVVSGKVVDENGSPLSGASVVLKANGKGTSTTVDGTFTMSGVDDGAILVIKYIGFDPKE 186
            Q++V G V D  G  + GASV +K   +GT T +DG FT++     A LVI +IG+   E
Sbjct: 18   QVLVKGTVKDNLGEGVPGASVQVKGTSQGTITDLDGKFTLNIPQKNATLVISFIGYVTVE 77

Query: 187  VKA-ARELGTIKLNLATSELDAVQIQAYTTTSKRLSLSNSVSVRAKEIEDQIVSNPLLAL 245
             KA +++   I L   T  LD V +  Y    +R    +       ++    V++   AL
Sbjct: 78   QKADSQKPMVITLKEDTKTLDEVVVVGYQEVRRRDLTGSVAKANMADVLTAPVASFDQAL 137

Query: 246  QGKVAGIQIQQVSGNAGATINVKIQGVSSFRGNSSPFFVVDGVPYSSTTMVGTGNINLWG 305
             G++AG+ +    G  G  +++ I+G +S    +SP FV+DG P   ++   T       
Sbjct: 138  GGRIAGVNVTSGEGMPGGNMSIVIRGNNSLTQENSPLFVIDGFPIEDSSAAST------- 190

Query: 306  EATPTALGVAGNNAGISYGSGNPLSFLNPDDIESIDVLKDADATAIYGSRAANGAIVITT 365
                                      LNP DIES+D LKDA ATAIYG+R ANG ++ITT
Sbjct: 191  --------------------------LNPSDIESLDFLKDASATAIYGARGANGVVIITT 224

Query: 366  KRGKPGTLQIDFSSRNGWNQATFGADFLNTEQYLGIRNEAYRNSNAVISATNYDLNGIWD 425
            K+GK G  Q+ +    G    T     ++  +++ ++NE Y    A     NY+    W 
Sbjct: 225  KKGKVGRAQLSYDGSFGVQHVTRTIPMMDAYEFVKLQNEMYPTVVAGSYLMNYE-GKQWT 283

Query: 426  KEKFT-----DWQKELIKTTGYDDASLSVSGGTLNSSYRLNLT-----GNRQNSAYARNF 475
             + +      +WQ E+ KT    + ++ ++GGT    Y  +L+     G    + Y R  
Sbjct: 284  LDDYKNIPQYNWQDEIFKTAWQQNHTVRLAGGTEGVRYNASLSYFDQDGTLIETGYKR-- 341

Query: 476  RNDNIALSISLNTASANQKFKLGIVGNYLNGF--NNLPSLNQTTAGSFLY--------LL 525
                  +   +NT     K  + +  NY       + PS    +  + L+        + 
Sbjct: 342  ------MQGRMNTVVRRGKLNMSLTTNYSRSIQTGSTPSSTSYSGMNNLFYSVWGYRPVT 395

Query: 526  PPNAPNLYNTDGTLNWDMDPTGTISRFRNPLSTYLTNPFEVKTNNFTSNITASYNIVNGL 585
             P+ P  +  D + +  +D +    RF NP+ +      +  TNN   N  A Y ++ GL
Sbjct: 396  SPDTPLSFLMDSSTDNAVDSSNDY-RF-NPIKSQKNEYRKSYTNNLQMNGFAEYEVLKGL 453

Query: 586  DFKTSFG--YNRLDQQEFTSNLAESVAPTARN----TFIRSGSYRFTNTNNYIIEPQILY 639
              K S G  Y+   Q +F ++      PT+ +       R     + N N    +  I  
Sbjct: 454  KLKVSAGYTYDSRKQDQFNNSNTRYGGPTSTDKVNAQVTRQERLTWLNENTLTYQTNIK- 512

Query: 640  NHQFSGHKLNFLLGATYNKSQGETSGITGSGQSSDSQVKNLSASSSFNQTGSSFYEYRYN 699
                  H LN L G T+  S  E      +   ++S      +      T S+   +   
Sbjct: 513  ----KKHFLNVLGGITFQNSDYEIYSFRTTHIPNESLGMAGMSEGQAGTTTSAKSSWAML 568

Query: 700  AGFFRLDYNFKERYLLGLSARRDGSTRFGPDNRFANFWSAAVGWIVSEETLVKEKLPWLN 759
            +   R+ YN+  +Y   +S R DGS++F  DNR+  F S ++ W  SEE  +K     L+
Sbjct: 569  SYLGRVTYNYMSKYYATVSFRADGSSKFNKDNRYGYFPSGSLAWSFSEEEFMKPLKSVLS 628

Query: 760  FFKLRANYGLTGSDGVGDYTFMDLY-----------SANTF---YLPYQN---VVGFAPG 802
              K+R ++GLTG++ +G+Y +  L            S N+      P+ N     G  P 
Sbjct: 629  SGKVRLSWGLTGNNRIGEYDYYALLAVLKSRVGSYTSTNSLPSGVYPFDNDATNAGVVPT 688

Query: 803  RLLNSKLQWEEKRSLNIGFDANLLNNRVTLGINYNRNRSSNLLQSLNLPVTAGFASVDVN 862
             L N  L+WE     N G D    + R+ + ++  R  + +LL   +LP ++G+ S   N
Sbjct: 689  SLPNKDLKWETTEQWNAGLDLGFFDERIGITMDIYRKTTRDLLLDASLPFSSGYYSATKN 748

Query: 863  FDALVQNTGWEYTIGVKLLAAKAFKWNVNANLTVPTNKLLSLPSL-----------DKVN 911
                V+N G E ++       +AFKW  N N++   NK+L+L                 N
Sbjct: 749  I-GKVRNDGLELSLNTVNFQTRAFKWTTNFNISFNKNKVLALSENQTALLTAAQFDQNYN 807

Query: 912  RVAGFGYHIGLPLGTTTMNTYMG--------------------------VNPLTGLEVLE 945
              + +   +GLP+G      Y G                           N   G+    
Sbjct: 808  GQSSYIAKVGLPMGLMYGYVYEGTYKYDDFNKSGNSYSLKPGVPHYSTETNTQPGMPKYA 867

Query: 946  DINGNPVATAGSTANMKTTLRNLYTSPFYAGLQSSFEYKGLSMNLSFDFNK----QLKPR 1001
            D+NG+ V  +     +   L  ++T     G  ++FEYKG+ +++ F ++         R
Sbjct: 868  DLNGDGVVDSNDRTIIGRGL-PIHT----GGFTNNFEYKGIDLSIFFQWSYGNDIMNANR 922

Query: 1002 YFFVSSRPGRDAYNQPEIAYSLNRW--ENP-GDIAVIQKYST--LLGSGLLTQTEAFYED 1056
             FF SS       NQ   A   NRW  ENP  DI      S+  ++ S ++       ED
Sbjct: 923  LFFESSNNRSRELNQ--FASYANRWTPENPTSDIPAATNSSSNRVISSRII-------ED 973

Query: 1057 ATYLRLTNIAISWNLPKSWTGIIGMKSSRIGINAQNLFTLSKYSGPDP 1104
             +YLRL N+ + +  P        +  +R+ + AQNL+T + YSG DP
Sbjct: 974  GSYLRLKNVTVGYTFPAKLVKKWKIDKARVYVAAQNLWTCTGYSGYDP 1021