Pairwise Alignments

Query, 445 a.a., signal recognition particle protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 457 a.a., signal recognition particle protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  412 bits (1059), Expect = e-119
 Identities = 216/447 (48%), Positives = 306/447 (68%), Gaps = 6/447 (1%)

Query: 1   MFDNLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKAFTDDVRQKAL 60
           MF+NL D+L R  K + G+G +TE N+ +T++E+R ALL+ADV     + F + V+++A+
Sbjct: 1   MFENLTDRLSRTLKTISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFVNAVKERAV 60

Query: 61  GQNVLTAVSPGQLLTKIMNDELAALMGGEVTELDTKANP-TIILIAGLNGAGKTTFAGKL 119
           GQ+V  +++PGQ+  KI+  EL   MG     L+  A P  +I++AGL GAGKTT   KL
Sbjct: 61  GQDVAKSLTPGQVFVKIVQSELEKAMGEANEALNLAAQPPAVIMMAGLQGAGKTTSVAKL 120

Query: 120 ALHLKGKGKKPLLV-AGDMYRPAAVDQLEVLGTSVGVSVYANRASNDPVGIALEGIAHGK 178
           +  L+ + KK +LV + D+YRPAA+ QLE L   V V  + +  S  P+ IA   I+H K
Sbjct: 121 SKFLRTRQKKSVLVVSADVYRPAAIKQLETLAKEVEVEFFPSDVSQKPIDIANAAISHAK 180

Query: 179 QNGNNVIIIDTAGRLAIDESLMNEISEVKAKTQPHEILFVVDSMTGQDAVNTAKVFNDRL 238
               +V+I+DTAGRL +DE++M+EI  + A  +P E LFVVD+MTGQDA NTAK FN+ L
Sbjct: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAAVKPIETLFVVDAMTGQDAANTAKAFNEAL 240

Query: 239 DFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGDV 298
             TGVVLTK+DGD RGGAALSI+ +  KPIKF+G GEK +AL+ F+PDR+ASRILGMGDV
Sbjct: 241 PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRVASRILGMGDV 300

Query: 299 VSLVERAQMQFDEKEAAELQKKIRK-NKFDFNDFYNQIQQIKKMGNMKDLMGMIPGVGKM 357
           +SL+E+ +   D+++A +L  K++    FD  DF  Q+QQ+K MG M  L+  +PGVG++
Sbjct: 301 LSLIEQVERGVDKEKAMKLASKVKSGGNFDLEDFREQLQQMKNMGGMMGLLEKLPGVGQL 360

Query: 358 MKN--VDIQDDAF-KSIEAIINSMTPFEKENPDAIQQSRRLRIAKGSGSKVEEVTKLIKQ 414
                  IQD    + +EAIINSMTP E++NPD I+ SR+ RIA GSG+++++V +L+KQ
Sbjct: 361 PPEAMAQIQDGKMTRQMEAIINSMTPGERQNPDIIKGSRKRRIAAGSGTQIQDVNRLLKQ 420

Query: 415 FEDMRKMMKQFSNPAAAAAMMKGMPKM 441
           F  M+KMMK+ S+      MM+ M  M
Sbjct: 421 FTQMQKMMKKMSSKGGMQKMMRAMGGM 447