Pairwise Alignments

Query, 445 a.a., signal recognition particle protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 504 a.a., Signal recognition particle protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  374 bits (959), Expect = e-108
 Identities = 202/450 (44%), Positives = 289/450 (64%), Gaps = 15/450 (3%)

Query: 1   MFDNLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKAFTDDVRQKAL 60
           MFD L  +L      L+ +GS++E +V   M+E+R ALL+ADV     K F   V+++A+
Sbjct: 1   MFDGLSGRLGDVLDKLRRRGSLSEADVDAAMREVRVALLEADVALAVVKQFVAQVKEQAI 60

Query: 61  GQNVLTAVSPGQLLTKIMNDELAALMGGE----------VTELDTKANPTI-ILIAGLNG 109
           GQ V+ +V+PGQ++ K+++D L  ++ GE             +D    P + IL+ GL G
Sbjct: 61  GQEVIRSVTPGQMVVKLVHDALVDMLSGEGGVEAEPDPMSLGIDIAHTPPVPILMVGLQG 120

Query: 110 AGKTTFAGKLALHLKGKGKKPLLVAG-DMYRPAAVDQLEVLGTSVGVSVYANRASNDPVG 168
           +GKTT + K+AL +  + +K +L+A  D+YRPAA  QL +LG   GV          PV 
Sbjct: 121 SGKTTTSAKIALRITKRERKKVLMASLDVYRPAAQRQLAILGEQTGVDTLEVVMGQKPVE 180

Query: 169 IALEGIAHGKQNGNNVIIIDTAGRLAIDESLMNEISEVKAKTQPHEILFVVDSMTGQDAV 228
           IA   +   +  G +V+I+DTAGRL IDE LM E++EV+A   PHE+L V D+MTGQDAV
Sbjct: 181 IARRAMQAARVGGYDVVILDTAGRLHIDEVLMTEVAEVRALVNPHEVLLVTDAMTGQDAV 240

Query: 229 NTAKVFNDRLDFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPDRM 288
           N A+ FN+++  TG+VLT++DGD+RGGAALS+++V   PIK +G GEKM+AL+ F+  R+
Sbjct: 241 NVAQEFNEKVGVTGIVLTRVDGDSRGGAALSMRAVTGVPIKLMGMGEKMDALEAFHAQRI 300

Query: 289 ASRILGMGDVVSLVERAQMQFDEKEAAELQKKIRKNKFDFNDFYNQIQQIKKMGNMKDLM 348
           A RILGMGDVV+LVE+A    +  +A  + K++ + KFD  D   QI+QIKKMG+MK L+
Sbjct: 301 AGRILGMGDVVALVEKAAETIEMDQAERVAKRMMEGKFDLEDMLAQIRQIKKMGDMKGLL 360

Query: 349 GMIPGVGKMMKNV---DIQDDAFKSIEAIINSMTPFEKENPDAIQQSRRLRIAKGSGSKV 405
           GM+PG+ KM + +    I D+  K  EAII SMT  E+ NPD ++ SR+ RIA GSGS V
Sbjct: 361 GMMPGISKMQRQMAESKIDDNMMKRQEAIILSMTIKERRNPDLVKASRKKRIADGSGSNV 420

Query: 406 EEVTKLIKQFEDMRKMMKQFSNPAAAAAMM 435
            EV KL+KQ + M  +MK+         +M
Sbjct: 421 PEVNKLLKQHQQMAVVMKKMKKMGGKKGLM 450