Pairwise Alignments

Query, 445 a.a., signal recognition particle protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 504 a.a., signal recognition particle protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  368 bits (945), Expect = e-106
 Identities = 199/447 (44%), Positives = 286/447 (63%), Gaps = 7/447 (1%)

Query: 1   MFDNLQDKLDRAFKVLKGQGSITEINVAETMKEIRKALLDADVNYKTAKAFTDDVRQKAL 60
           MF+NL D+L   F  L  QG+++E +VA  ++E+R ALL+ADV+   A+ F   V++KA 
Sbjct: 1   MFENLSDRLSGVFDRLTKQGALSEADVATALREVRVALLEADVSLPVARDFIKAVQEKAT 60

Query: 61  GQNVLTAVSPGQLLTKIMNDELAALMGGEVTELDTKAN--PTIILIAGLNGAGKTTFAGK 118
           GQ V  +V+PGQ + KI++DEL  ++ G+      K +  P  IL+ GL G GKTT   K
Sbjct: 61  GQAVTKSVTPGQQVVKIVHDELVHVLQGDEDPGALKIDNPPAPILMVGLQGGGKTTTTAK 120

Query: 119 LALHLKGK-GKKPLLVAGDMYRPAAVDQLEVLGTSVGVSVYANRASNDPVGIALEGIAHG 177
           +A  LK + GKK L+ + D+ RPAA++QL +LG  +GV         DPV IA       
Sbjct: 121 IAKRLKERDGKKILMASLDVNRPAAMEQLAILGAQIGVDTLPIVKGEDPVAIARRAKTQA 180

Query: 178 KQNGNNVIIIDTAGRLAIDESLMNEISEVKAKTQPHEILFVVDSMTGQDAVNTAKVFNDR 237
              G +V ++DTAGRL+IDE LM ++  V+    P E L VVD +TGQDAV TA+ F+DR
Sbjct: 181 SLGGYDVYMLDTAGRLSIDEELMAQVEAVRDVANPRETLLVVDGLTGQDAVTTAENFDDR 240

Query: 238 LDFTGVVLTKLDGDTRGGAALSIKSVVNKPIKFIGTGEKMEALDVFYPDRMASRILGMGD 297
           +  TGVVLT++DGD RGGAALS+++V  +PI+F+G GEKM+AL+ F PDR+A RILGMGD
Sbjct: 241 IGITGVVLTRMDGDGRGGAALSMRAVTGRPIRFVGLGEKMDALETFEPDRVAGRILGMGD 300

Query: 298 VVSLVERAQMQFDEKEAAELQKKIRKNKFDFNDFYNQIQQIKKMGNMKDLMGMIPGVGKM 357
           +V+LVE+AQ   + ++A  + K+ +K +F+ ND   Q++Q++KMG ++ LMGM+PG+ KM
Sbjct: 301 IVALVEKAQETIEAEQAERMMKRFQKGQFNMNDLRGQLEQMEKMGGVEGLMGMMPGMSKM 360

Query: 358 MKNVD---IQDDAFKSIEAIINSMTPFEKENPDAIQQSRRLRIAKGSGSKVEEVTKLIKQ 414
              +D     D   +   A+I SMT  E+ NP  +Q SR+ RIAKG+G +V ++ KL+K 
Sbjct: 361 KGKLDEAGFDDKVIRRQIALIQSMTKKERANPQILQASRKKRIAKGAGMEVSDLNKLLKM 420

Query: 415 FEDMRKMMKQFSNPAAAAAMMKGMPKM 441
              M   MK+         MMK +  M
Sbjct: 421 HRQMSDAMKKMGK-MGKKGMMKSLGGM 446