Pairwise Alignments

Query, 278 a.a., N-acetylmuramoyl-L-alanine amidase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 47/107 (43%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 102 KAGTSAHYVISRDGKVVHMVNDYLRANHAGVSKWGKDTDLNSSSIGIELDNNGLTDPWPD 161
           K   SAH VI RDG+VV  V  +LRA HAGVS +      N  SIGIEL+ +    P+ D
Sbjct: 69  KMRVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGSDFV-PYTD 127

Query: 162 AQINSLIKLLATLKKTY-GIPTANFIGHADIAPKRKNDP-KNFPWKK 206
           AQ  +L +L   L   Y  I      GH  IAP RK DP   F W++
Sbjct: 128 AQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRR 174