Pairwise Alignments

Query, 352 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 373 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  254 bits (648), Expect = 3e-72
 Identities = 138/349 (39%), Positives = 205/349 (58%), Gaps = 7/349 (2%)

Query: 2   VTAKKTDIRALDLPQLQQHLVAMQQPAFRAKQIYQWLWEKSATSFEQMSNLSKDLRKALD 61
           ++ KK ++  LDLP L+  L  M +  FRA+QI QW++    + FEQM+N++K +R  L 
Sbjct: 1   MSEKKINLLDLDLPGLKALLTEMGEKPFRAQQIMQWIYHFGVSDFEQMTNINKAMRAKLA 60

Query: 62  ETFAINAVQVNNSQFSNDHTIKNTFRLADGNIVEGVLIPLEDRMTACVSSQVGCSLTCKF 121
               I A ++ + Q S+D TIK    +  G  VE V IP +DR T CVSSQVGC+L C F
Sbjct: 61  ARCEIVAPEITSYQKSSDGTIKFAINVGQGQEVETVYIPEDDRATLCVSSQVGCALECTF 120

Query: 122 CATGYMDRKRNLNADEIYDQVVLIDK---QAKQNYNNPLTNIVYMGMGEPLLNYANVLKS 178
           C+T      RNL   EI  Q+  +       K+    P++N+V MGMGEPLLN ANV+ +
Sbjct: 121 CSTAQQGFNRNLTVSEIVGQIWRVSHFLGFQKETGERPISNVVMMGMGEPLLNLANVVPA 180

Query: 179 IERITAPDGLNMSYKRITVSTAGIAKMIKKLGDDGAKFNLALSLHAADDKKRNEIMPINE 238
           +  +    G  +S +R+T+ST+G+   + KLG D     LA+S+HA +D+ R+ ++PIN+
Sbjct: 181 MNIMLDDYGFGLSKRRVTLSTSGVVPALDKLG-DVIDVALAVSIHAPNDELRDVLVPINK 239

Query: 239 ANSLKALADALKYYFAKT---KNPVTYEYIVFNHFNDEISDAMDLAKFCKHIPCKVNLIE 295
              L+    A++ Y  K+   +  VT EY++ +H ND    A +LAK  K  PCK+NLI 
Sbjct: 240 KYPLQEFLAAIRRYLEKSNANRGRVTLEYVMLDHINDSTDQAHELAKLMKDTPCKINLIP 299

Query: 296 YNPISFADFTNAEGDKIDAFSNYLKSQGINTNIRRSRGKDIDAACGQLA 344
           +NP   + +  +   +ID F+  L    +   +R++RG DIDAACGQLA
Sbjct: 300 FNPYPGSPYGRSSNSRIDRFAKVLMEYDLTVIVRKTRGDDIDAACGQLA 348