Pairwise Alignments

Query, 352 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 389 a.a., 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN from Bifidobacterium breve UCC2003

 Score =  199 bits (507), Expect = 8e-56
 Identities = 123/333 (36%), Positives = 179/333 (53%), Gaps = 14/333 (4%)

Query: 27  PAFRAKQI---YQWLWEKSATSFEQMSNLSKDLRKALDETFAINAVQVNNSQFSNDHTIK 83
           P FR KQ+   Y   ++ +A  F       +D  +A    F     +V         TIK
Sbjct: 58  PKFRVKQLANHYFGHFDVNAAEFTDFPAAKRD--EAAAAFFPQLITEVTRQVADEGTTIK 115

Query: 84  NTFRLADGNIVEGVLIPLEDRMTACVSSQVGCSLTCKFCATGYMDRKRNLNADEIYDQVV 143
             ++L DG+++E VL+    R T C+SSQVGC + C FCATG +   RN++  EI +QV 
Sbjct: 116 TLWKLFDGSLIESVLMRYPTRTTLCISSQVGCGMGCPFCATGKLGLTRNMSTGEIVEQVR 175

Query: 144 LIDKQAKQNY----NNPLTNIVYMGMGEPLLNYANVLKSIERITA--PDGLNMSYKRITV 197
           +  K  +          L+NIV+MGMGEP+ NY +VL ++ +I+A  P+G  +S + ITV
Sbjct: 176 VAAKMMRDGEVAGGEGRLSNIVFMGMGEPMGNYNSVLSAVRQISAMPPEGFGISARNITV 235

Query: 198 STAGIAKMIKKLGDDGAKFNLALSLHAADDKKRNEIMPINEANSLKALADALKYYFAKTK 257
           ST G+   IKKL  +G    LA+SLHA  D+ R+E++P+N+  +   + DA   Y+  +K
Sbjct: 236 STVGVVPGIKKLTAEGIPVRLAVSLHAPSDELRDELVPMNKRFNTTQVLDAAHDYWLASK 295

Query: 258 NPVTYEYIVFNHFNDEISDAMDLAKFCKHIP---CKVNLIEYNPISFADFTNAEGDKIDA 314
             V+ EY +    ND+   A  LAK   H       VN I  NPI  + +T ++ +    
Sbjct: 296 RRVSIEYALMRGINDQAEHAQLLAKRLNHYGDNWAHVNPIPLNPIEGSKWTASKPEDEKQ 355

Query: 315 FSNYLKSQGINTNIRRSRGKDIDAACGQLAVKE 347
           F   L   GI   +R +RG+DID ACGQLA KE
Sbjct: 356 FLEILHRAGITATLRDTRGQDIDGACGQLAAKE 388