Pairwise Alignments

Query, 467 a.a., lytic transglycosylase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 398 a.a., Slt family transglycosylase (RefSeq) from Shewanella amazonensis SB2B

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 79/303 (26%), Positives = 143/303 (47%), Gaps = 48/303 (15%)

Query: 114 LKDYNIPQEIKYLTIVESQMNPHAISRVGATGIWQFMFGTGKAYGLKMDNFVDERKDPIQ 173
           L+  ++P E+  L ++ES  +P  +  +G  G+WQ    TG+ + L+++   D R DPI 
Sbjct: 132 LEARDMPLELALLPLIESGYHP-GVKGLGGAGLWQLSAQTGRNHHLRVNQSFDGRLDPIP 190

Query: 174 ASYAAAAYFRDAFEEL-GDWLLAIAAYNCGKGNVNRAID----KAGSRDFWVIRQFLPKE 228
           A+ AA  Y    +E    DWL A+AAYN G+G +  AI+    K  + DF  +       
Sbjct: 191 ATRAALDYLLYLYEMFNNDWLSAVAAYNMGEGKLKTAIERNRRKGKAEDFLALGL----- 245

Query: 229 TRNYVPA---FIAAVYVMN--YSGKHQITAQASSMFLKTDTVQTTRFVSLSTLAKVLNVD 283
           +RN  P    ++AA+ V+    +        A++  L  + V     V+LS +A+ + + 
Sbjct: 246 SRNQAPTLYKWLAALAVLRDPQTQSASFPPIANAPVLAREAVPNG--VALSNIAQAMGMS 303

Query: 284 EAAIMALNPSYKKKIVNGTDDEPKRIVMPKLRDIDYAGIYDVLNNQEVEVNMKVVAASTD 343
              +  LNP+++  IV                   ++G Y +      E  +  + A+  
Sbjct: 304 AKELSRLNPAFRDGIV------------------PFSGKYQI---NLPESRLPALNAALV 342

Query: 344 DVRDLRKKKTKSIATTAVVYHKVTSGQSLTTVADKYGVEVQDLRVWNGLKSKTLV-PGQR 402
           ++R     K  S        ++V SG +L+ +A ++G+ +  L   NGL  K+++ PGQ+
Sbjct: 343 NLRPSTPGKGGS--------YQVKSGDTLSGIAKRHGMRLDKLLSLNGLNMKSIIKPGQQ 394

Query: 403 LKI 405
           L++
Sbjct: 395 LRL 397



 Score = 35.4 bits (80), Expect = 3e-06
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 24/134 (17%)

Query: 348 LRKKKTKS-----IATTAVVYHK-VTSGQSLTTVADKYGVEVQDLRVWNGLKSKTLVP-- 399
           LR  +T+S     IA   V+  + V +G +L+ +A   G+  ++L   N      +VP  
Sbjct: 263 LRDPQTQSASFPPIANAPVLAREAVPNGVALSNIAQAMGMSAKELSRLNPAFRDGIVPFS 322

Query: 400 GQRLKIYAKNRTPL----------KAPSSFLSYKVKTGDTLSEIAEKFDGATVQSIRRDN 449
           G+      ++R P             P    SY+VK+GDTLS IA++        +R D 
Sbjct: 323 GKYQINLPESRLPALNAALVNLRPSTPGKGGSYQVKSGDTLSGIAKR------HGMRLDK 376

Query: 450 RLSKAGLQVGMILK 463
            LS  GL +  I+K
Sbjct: 377 LLSLNGLNMKSIIK 390