Pairwise Alignments

Query, 261 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase from Pedobacter sp. GW460-11-11-14-LB5

Subject, 309 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Bifidobacterium breve UCC2003

 Score =  121 bits (304), Expect = 2e-32
 Identities = 96/278 (34%), Positives = 139/278 (50%), Gaps = 23/278 (8%)

Query: 4   VKAKKHLGQHFLTDKGIANRIV-EALVNTDKYKQVLEVGPGMGILSDFLLQRTDLETYLI 62
           +   K  GQ+F+ D G   RIV EA V T+ +  V+EVGPG+G L+  +L+ T      +
Sbjct: 26  ISPTKKFGQNFVIDPGTVRRIVREADVTTNDH--VMEVGPGLGSLTLAILE-TGATMTAV 82

Query: 63  DIDTESFHFLN----EKYPQLGDRL--INGDFLKLDFDAI--FPGQ--FAIIGNFPYNIS 112
           +ID      L     E  P+  DRL  +N D L +  D +  F G   F ++ N PYN++
Sbjct: 83  EIDPPLAERLPRTVAEFMPEAADRLTVVNRDALTVTPDNVPDFNGDTSFTLVANLPYNVA 142

Query: 113 SQILFKILDNRNKVVEMVGMFQKEVAQRCAAPAGNKEYGILSVFLQAYYKIEYLFTVKPG 172
           + IL  +L+  + +   + M QKEVA R AA  G+K YG  SV L  Y   E + T+   
Sbjct: 143 TPILLTLLERFDSLGSFLVMVQKEVADRLAAKPGSKIYGTPSVKLAWYGTAERVGTIGRN 202

Query: 173 TFNPPPKVHSAVIRLTRNEVETL--------DCDEKLFWRVVKAGFNQRRKTLRNAVSAV 224
            F P P V SA+++ TR   +            D +L +R++ A F QRRKTL  A+  +
Sbjct: 203 VFWPAPNVDSALVKFTRYAADDTQAPSHGKSSADRELVFRLIDAAFGQRRKTLHAALKTI 262

Query: 225 MPKDKM-DDHIYFEKRAEQLTVADFVALTQHVTKLMEA 261
           +P +      I   +R E LTV +F AL   V     A
Sbjct: 263 VPAEAFAAAGIDPTRRGETLTVTEFAALAAAVQSTSHA 300