Pairwise Alignments

Query, 425 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 988 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 47.8 bits (112), Expect = 2e-09
 Identities = 28/101 (27%), Positives = 61/101 (60%), Gaps = 7/101 (6%)

Query: 20  FLLIFLPQVLLAQNM-LSGKIIDNDSGKAVAGANIYINNTTIGRMSNEEGFFSFDNIPLG 78
           FL + +P +   +N+ ++GK++D+ SG+ + G +I + N  +G  ++  G F+  +IP  
Sbjct: 30  FLCVCVPSLYGVENLNVTGKVVDS-SGEPLIGVSIKVENKNMGTTTDINGNFTLADIPKN 88

Query: 79  TQELVITFVGYETISYSFSSSQLPLKLDFKLKQKTQELDEV 119
           T  LV+T++G ET   + + +    +L+  +++ + +L+EV
Sbjct: 89  T-VLVLTYIGMETQKVTVTQN----RLNIVMRENSVQLEEV 124