Pairwise Alignments

Query, 425 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1026 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 48.5 bits (114), Expect = 9e-10
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 21  LLIFLPQVLLAQNMLSGKIIDNDSGKAVAGANIYINNTTIGRMSNEEGFFSFDNIPLGTQ 80
           L + +  V      ++G +I  + G+ V GA++ +  TT G +++ +G F+  N+P   +
Sbjct: 7   LFVGISLVTAQTQKVTGVVISEEDGQPVVGASVLVKGTTQGTITDIDGNFNLANVPSSAK 66

Query: 81  ELVITFVGYETISYSFSSSQLPLKLDFKLKQKTQELDEVKIGA 123
            L I+++G +T   +         +   LK   Q LDEV + A
Sbjct: 67  TLQISYIGMQTQEVAIKP-----MVKVTLKSDAQNLDEVIVVA 104