Pairwise Alignments

Query, 425 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1050 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 49.3 bits (116), Expect = 6e-10
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 16/113 (14%)

Query: 18  ILFLLIFLPQVLL---------AQNMLSGKIIDNDSGKAVAGANIYINNTTIGRMSNEEG 68
           I FLLI    V L         +   +SGKI+D ++   +AGA + +  +T G +S+ +G
Sbjct: 15  IAFLLIIESYVTLQAQTSSSNNSSKAISGKIVD-ETDLPIAGATVQVKGSTKGAISDIDG 73

Query: 69  FFSFDNIPLGTQELVITFVGYETISYSFSSSQLPLKLDFKLKQKTQELDEVKI 121
            F+  + P     L+ +F+GY++I Y        +    KL  K  ELDEV +
Sbjct: 74  LFTISSEP--GSILIFSFLGYQSIEYKIDK----VPQTIKLLPKVDELDEVTV 120