Pairwise Alignments

Query, 425 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1064 a.a., putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 52.0 bits (123), Expect = 9e-11
 Identities = 28/95 (29%), Positives = 57/95 (60%), Gaps = 5/95 (5%)

Query: 27  QVLLAQNMLSGKIIDNDSGKAVAGANIYINNTTIGRMSNEEGFFSFDNIPLGTQELVITF 86
           Q ++    + G ++D ++G+ + G +I +  T+ G +++ +G FS  N+P G++ELV+++
Sbjct: 46  QAVMQTKTVKGTVLD-ENGEPLIGVSIVVKGTSTGTITDFDGKFSI-NLPAGSKELVVSY 103

Query: 87  VGYETISYSFSSSQLPLKLDFKLKQKTQELDEVKI 121
           +GY+  +   S +     L+ K+   TQ LDEV +
Sbjct: 104 IGYKEQAIIVSGN---APLNIKMVPDTQALDEVVV 135