Pairwise Alignments

Query, 241 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 242 a.a., two-component system response regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  133 bits (334), Expect = 4e-36
 Identities = 78/239 (32%), Positives = 140/239 (58%), Gaps = 12/239 (5%)

Query: 2   INCIIVDDEDHAIEVIQHYLKSVAAIQITATFTNPIDALSFLSSNPVELIFLDIHMPEIS 61
           + CI +DDE  A++ +  Y+  V  + +  +  +  +A+  L+   ++LIF+DI+MP+++
Sbjct: 1   MKCIAIDDEPLALKQLTDYISRVPFLSLVKSCQDAFEAMKVLADEEIDLIFVDINMPDLN 60

Query: 62  GIDFIQTMNNKDVQVILTTAYKEFATAGFDLDVVDYLVKPIPLPRFLQAINKAQK----- 116
           G+DFI+++ ++ + V+ TTAY E+A  GF LD VDYL+KP      L+A +KA+K     
Sbjct: 61  GLDFIRSLISRPM-VVFTTAYSEYAVDGFKLDAVDYLLKPFEFQDLLKAADKARKQYEYR 119

Query: 117 IINSKKANIPVNQQDDDYFMVKTEAKGKMLKINIAEIDFVEGMKNYIAFHHNG--IRTLA 174
           ++  +      +Q   D   VK++   K+++I++  I ++EGM  Y+     G     + 
Sbjct: 120 MLEQQGELGNSSQIKGDSLFVKSDY--KVVRIDVKNIRYIEGMSEYVRIFIEGEDKPVIT 177

Query: 175 LLTMKDVEERLPKAQFIRVQKSFIVALNKITSIDGNRIILKGISAEILIGETYRKDFLD 233
           L +++ +EERLP   F+RV +S+IV L KIT +   RII    +  I +G+ Y++ F +
Sbjct: 178 LASLQKMEERLP-TYFMRVHRSYIVNLRKITEVSRLRIIFDR-NTYIPVGDNYKERFAE 234