Pairwise Alignments

Query, 243 a.a., tRNA pseudouridine(55) synthase TruB from Pedobacter sp. GW460-11-11-14-LB5

Subject, 304 a.a., tRNA pseudouridine synthase B (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  126 bits (317), Expect = 4e-34
 Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 4/199 (2%)

Query: 18  LLLINKPYKWTSFDVVGKIRNSLKPLKLKVGHAGTLDPLATGLLIICTGKLTKQIDTFQA 77
           LL+++KP   +S   + K++   +    K+GHAGTLDP+A G+L++  G  TK      A
Sbjct: 8   LLVLDKPSGPSSAQCISKVKRLGQK---KIGHAGTLDPMAGGVLLVLLGHATKISGHLMA 64

Query: 78  E-EKEYTGTMILGATTPSFDMETEVDQTFDISNISEDEIYAACKPFIGDIEQYPPAHSAV 136
           + EK Y GT+ LG TT ++D E  V  T    +++E ++ A    ++G  EQ  P +SA 
Sbjct: 65  DGEKVYAGTLRLGETTDTWDAEGTVTATAPWHHVTEADVRAIVDSWLGSSEQEVPPYSAA 124

Query: 137 KVNGERLYVKARLGEEVELRKRFVSVLEFEITRIELPEIDFRIVCSKGTYIRSLISDFGK 196
           K  G+ LY  +R G E  ++ + V +   E+   +LP + FR+ CS GTYIRSL    G 
Sbjct: 125 KHQGQPLYKLSRAGRETPVKTKTVEISLAEVVWCDLPHVRFRVRCSSGTYIRSLAHSLGI 184

Query: 197 TLNRGAYLSKLTRTRSGNF 215
            L  GA L++LTR  S  F
Sbjct: 185 RLGCGAVLTELTREYSHPF 203