Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 1053 a.a., TonB-dependent receptor for chondroitin sulfate and hyaluronic acid (susC-like) (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score =  243 bits (619), Expect = 7e-68
 Identities = 279/1116 (25%), Positives = 456/1116 (40%), Gaps = 175/1116 (15%)

Query: 9    LSIL-LLCMATISAFAQKTVSGTVTDNQGLPLAGVSVFLKGTTKGTSTSTEGKYTLSVP- 66
            LSIL +L ++     AQ  V GTV DN G  + G SV +KGT++GT T  +GK+TL++P 
Sbjct: 2    LSILGMLLLSVPFVLAQVLVKGTVKDNLGEGVPGASVQVKGTSQGTITDLDGKFTLNIPQ 61

Query: 67   SNSTIVFKYLGYLNKEVSVGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNI 126
             N+T+V  ++GY+  E        + +TL +D K L EVVV G  E R  R+L  ++   
Sbjct: 62   KNATLVISFIGYVTVEQKADSQKPMVITLKEDTKTLDEVVVVGYQEVRR-RDLTGSVAKA 120

Query: 127  KGDQIRAANTINPIAALQGLVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENTPLIVVDG 186
                +  A   +   AL G + G+ V  G G P  +    IRG +SL   EN+PL V+DG
Sbjct: 121  NMADVLTAPVASFDQALGGRIAGVNVTSGEGMPGGNMSIVIRGNNSL-TQENSPLFVIDG 179

Query: 187  VILSDDAMSPARAGDQDFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLITTKK 246
              + D + +              ++N  DIES+  LK  S TA+YG+R  NGV++ITTKK
Sbjct: 180  FPIEDSSAA-------------STLNPSDIESLDFLKDASATAIYGARGANGVVIITTKK 226

Query: 247  GFAQKGLGISFSHDETFDNAYALPDMQQEYGSGFTPRDFIKGANGMNQINSASYGFSFGP 306
            G   +      S+D +F   +    +           +F+K  N M           +  
Sbjct: 227  GKVGRA---QLSYDGSFGVQHVTRTIPM-----MDAYEFVKLQNEM-----------YPT 267

Query: 307  KLDGSTILDIDGRQIS-NSILNNPL-----SLYETGRYVNSNISMQGGNEKTTFRFSYAN 360
             + GS +++ +G+Q + +   N P       +++T    N  + + GG E   +  S + 
Sbjct: 268  VVAGSYLMNYEGKQWTLDDYKNIPQYNWQDEIFKTAWQQNHTVRLAGGTEGVRYNASLSY 327

Query: 361  NFTKGISPYNKLNRHTFNFRGTQRLGDAVVIDATASYSN--VRGFNPQ--RISGDNSLIY 416
                G        R         R G  + +  T +YS     G  P     SG N+L Y
Sbjct: 328  FDQDGTLIETGYKRMQGRMNTVVRRG-KLNMSLTTNYSRSIQTGSTPSSTSYSGMNNLFY 386

Query: 417  GLTWGY--------PTNFDLDYWKDNYIDPVNGGRSTVDPFTTNQLFFRLNKFSQIQNEN 468
             + WGY        P +F +D   DN +D  N  R   +P  + +  +R +  + +Q  N
Sbjct: 387  SV-WGYRPVTSPDTPLSFLMDSSTDNAVDSSNDYR--FNPIKSQKNEYRKSYTNNLQ-MN 442

Query: 469  NFRGTINAKTNFTKWLQLETSASLNWYNTNKEDRELGQDPGFKGGYYGSGIRNVIDSRYR 528
             F     A+    K L+L+ SA    Y++ K+D+    +  + GG   +   N   +R  
Sbjct: 443  GF-----AEYEVLKGLKLKVSAGYT-YDSRKQDQFNNSNTRY-GGPTSTDKVNAQVTRQE 495

Query: 529  AGLNLNHKVNDFDLFLQLGSEVVRSQSKGANYGTSGGLKVPAQYRLSNSINTPTVGEGTP 588
                LN     +   ++          K       GG+          S  T  +    P
Sbjct: 496  RLTWLNENTLTYQTNIK----------KKHFLNVLGGITFQNSDYEIYSFRTTHI----P 541

Query: 589  NISQVFASYAQGSIG-----YKNWLTLNLYARKEWNSTLVY-------SNGTGNYNY--- 633
            N S   A  ++G  G       +W  L+   R  +N    Y       ++G+  +N    
Sbjct: 542  NESLGMAGMSEGQAGTTTSAKSSWAMLSYLGRVTYNYMSKYYATVSFRADGSSKFNKDNR 601

Query: 634  --FYPGADLAWIFTD---ALKMPSVFSYGKLRASYVVTGGGTVVYRSNTGYYL------- 681
              ++P   LAW F++      + SV S GK+R S+ +TG   +       YY        
Sbjct: 602  YGYFPSGSLAWSFSEEEFMKPLKSVLSSGKVRLSWGLTGNNRI---GEYDYYALLAVLKS 658

Query: 682  KGSNYQAVNSNTANIEQYGFDSQTLG-------NPDLKPLRAFSKEIGIELKMFKNRLGL 734
            +  +Y + NS  + +  +  D+   G       N DLK         G++L  F  R+G+
Sbjct: 659  RVGSYTSTNSLPSGVYPFDNDATNAGVVPTSLPNKDLKWETTEQWNAGLDLGFFDERIGI 718

Query: 735  DFTAYRKNTKNQIINLSVPSESGVQNRLINSGDVQDQGIEFILSGTPIKTQSFSWDAFFN 794
                YRK T++ +++ S+P  SG  +   N G V++ G+E  L+    +T++F W   FN
Sbjct: 719  TMDIYRKTTRDLLLDASLPFSSGYYSATKNIGKVRNDGLELSLNTVNFQTRAFKWTTNFN 778

Query: 795  YTRNRNKIISLAPG----VTTVQLEGGDGIRT--IAKVGGEYSTLVAAYGYA-----KYQ 843
             + N+NK+++L+      +T  Q +     ++  IAKVG     +   YGY      KY 
Sbjct: 779  ISFNKNKVLALSENQTALLTAAQFDQNYNGQSSYIAKVGLPMGLM---YGYVYEGTYKYD 835

Query: 844  ARDANGNPIDNPNNGKRVISPAGTGGAFYTRASNYANGL---ESESTIGSTLPKFYGSIR 900
              + +GN            +   T       A    +G+      + IG  LP   G   
Sbjct: 836  DFNKSGNSYSLKPGVPHYSTETNTQPGMPKYADLNGDGVVDSNDRTIIGRGLPIHTGGFT 895

Query: 901  NVFTYKSLSLSALIDAKFGGYVFSDTYFYGSQTGNLKNTLFGRTVENGGTAYTEAGNQEI 960
            N F YK + LS      +G  + +    +   + N    L      N   +Y      E 
Sbjct: 896  NNFEYKGIDLSIFFQWSYGNDIMNANRLFFESSNNRSREL------NQFASYANRWTPE- 948

Query: 961  GVVLDGVFADGTIINGVNVGGMSHQQAIDKGLRIPTITWRYYNNSNGWGNGIRERGAFKS 1020
                                        +    IP  T    N+S+     I  R     
Sbjct: 949  ----------------------------NPTSDIPAAT----NSSS--NRVISSRIIEDG 974

Query: 1021 SWVAVRDITLSYDLPKAFVSKIKMNGVKVYASARNI 1056
            S++ ++++T+ Y  P   V K K++  +VY +A+N+
Sbjct: 975  SYLRLKNVTVGYTFPAKLVKKWKIDKARVYVAAQNL 1010