Pairwise Alignments

Query, 1100 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

Subject, 984 a.a., outer membrane protein Omp121 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  337 bits (865), Expect = 2e-96
 Identities = 284/1039 (27%), Positives = 471/1039 (45%), Gaps = 128/1039 (12%)

Query: 81   KEVSVGDNNTINVTLLDDAKALGEVVVTGLGEERNTRNLGYAMNNIKGDQIRAANTINPI 140
            +EV++  N  + V L  DA+ + EVVVT +G +R+ + LGYA  ++ G++I  + T + +
Sbjct: 4    QEVAIKPN--LKVVLRSDAQQIDEVVVTAMGIKRSEKALGYAATSVGGEKIAESRTSDVM 61

Query: 141  AALQGLVPGMMVQPGTGGPQSSPKFQIRGASSLYGSENTPLIVVDGVILSDDAM--SPAR 198
            ++L G + G+ +   +  P +S    IRG SSL G+ N PL VVDGV L++  +  +   
Sbjct: 62   SSLAGKIAGVQISSTSSDPGASNSVIIRGVSSLSGT-NQPLYVVDGVPLNNSTVYSTDGL 120

Query: 199  AGDQDFGNVLKSINSDDIESISVLKGGSVTALYGSRAINGVLLITTKKGFAQKGLGISFS 258
                DFGN   +IN DD+ ++++LKG + TALYGSRA NGV++ITTK G  +KG+GI ++
Sbjct: 121  NSGYDFGNGANAINPDDVANMTILKGAAATALYGSRAANGVVMITTKSGRKEKGVGIEYN 180

Query: 259  HDETFDNAYALPDMQQEYGSGFTPRDFIKGANGMNQINSASYGFSFGPKLDGSTILDIDG 318
                +     LP+ Q E+G G+            N  ++     S+GP+ DGS  + + G
Sbjct: 181  GGVQWSTVLRLPEFQNEFGMGW------------NGNHTELENGSWGPRFDGS--MQLWG 226

Query: 319  RQISNS--------ILNNPLSLYETGRYVNSNISMQGGNEKTTFRFSYANNFTKGISPYN 370
               +NS        + +N    ++ G   ++++S  G  +K+ +  S++     G+ P +
Sbjct: 227  NVYNNSQKLKPYVAMPDNIKDFFDAGFRYSNSLSFNGATDKSDYYVSFSQISDDGMIPTD 286

Query: 371  --KLNRHTFNFRGTQRLGDAVVIDATASYSNVRGFNPQRISGDNSLIYGLTWGYPTNFDL 428
                +++TF+ RG+ + G A+   ++ +Y+  +  N    +G    +    +  P +  +
Sbjct: 287  ADSYDKYTFSARGSHKAG-ALTFSSSLNYAYQK--NNFATTGQGLSMLNSLYQTPRDISI 343

Query: 429  DYWKDNYIDPVNGGRSTVDPFTTNQLFFRLNKFSQIQNENNFRGTINAKTNFTKWLQLET 488
               +D   DP N       P+     ++ LN +        F G       F K+ +   
Sbjct: 344  IGLEDQN-DPFNTPGYYYTPYGVMNPYYILNNYLNEYESERFYGKFQLDYEFLKYFKFTY 402

Query: 489  SASLN----------------WYNTNKEDRELGQDPGFKG--GYYGSGIRNVIDSRYRAG 530
               L+                +Y         G    F G  G Y   I    +      
Sbjct: 403  RMGLDTTTGQSDKGKPNLYALYYEGTPNGEGQGSSSPFSGETGQYSEQITRRREINQDIM 462

Query: 531  LNLNHKVNDFDLFLQLGSEVVRSQSKGANYGTSGGLKVPAQYRLSNSINTPTVGEGTPNI 590
            +N N  VNDF++   +G      +     Y     L +P  + L NS  TP V E    +
Sbjct: 463  VNFNMPVNDFNINALVGFNG-NERKVSYQYSEVNDLTIPTWFNLKNSGKTPIV-EQHMEL 520

Query: 591  SQVFASYAQGSIGYKNWLTLNLYARKEWNSTLVYSNGTGNYNYFYPGADLAWIFTDALK- 649
             ++   + Q    +KN L L + AR +W+STL   N +    +FYPG   ++IF++ L  
Sbjct: 521  RRLMGVFGQFEGSWKNMLYLTVTARNDWSSTLPKENRS----FFYPGITGSFIFSELLND 576

Query: 650  -MPSVFSYGKLRASYVVTGGGTVVYRSNTGYYLKGSNYQAVNSNT---ANIEQYGFDSQT 705
             +  V ++GK+RAS+  TG    VY  N   Y + SN     S T     +  Y   +  
Sbjct: 577  NLQDVITFGKIRASWGKTGNDADVYMVNP-VYAQSSNRIPFGSLTFPLGGVNAYSAGN-V 634

Query: 706  LGNPDLKPLRAFSKEIGIELKMFKNRLGLDFTAYRKNTKNQIINLSVPSESGVQNRLINS 765
            LG+  L P      E+G+ +  FKNRL  D + Y +NT  QI +L++   SG   + +N 
Sbjct: 635  LGSNTLSPEMTTESEVGLNMAFFKNRLSFDVSYYNRNTDKQIFSLAMDPASGYTAQNMNL 694

Query: 766  GDVQDQGIEFILSGTPIKTQSFSWDAFFNYTRNRNKIISLAP---GVTTVQ-LEGGDGIR 821
            G ++++GIE ++SGTPI+T+ FSW+  +N+T+N +K+ISL     G+TT+  L GG  + 
Sbjct: 695  GKIRNRGIELLISGTPIRTKDFSWELTWNFTKNWSKVISLPEELGGITTIYGLNGGTSMY 754

Query: 822  TIAKVG-GEYSTLVAAYGYAKYQARDANGNPIDNPNNGKRVISPAGTGGAFYTRASNYAN 880
             I  +  G +   VA         RD  G  + N + G  V             AS +  
Sbjct: 755  AITGMPVGVFKAQVA--------ERDPQGRIVVNSSTGLPV------------EASEF-- 792

Query: 881  GLESESTIGSTLPKFYGSIRNVFTYKSLSLSALIDAKFGGYVFSDTYFYGSQTGNLKNTL 940
                    G    K+   +     YK +SL    D + GG ++S T      TGN   T 
Sbjct: 793  -----GICGDMNNKYQMGVSTNLKYKGISLGIDFDIRQGGVMYSRTKDINYFTGNAIQTA 847

Query: 941  FGRTVENGGTAYTEAGNQEIGVVLDGVFADGTIINGVNVGGMSHQQAIDKGLRIPTITWR 1000
            +               ++   +V + V     I+NG NV  + +   I            
Sbjct: 848  Y--------------NDRNPLIVPNSV---NKIVNGENVTYVENTTPITSS--------- 881

Query: 1001 YYNNSNGWGNGIRERGA---FKSSWVAVRDITLSYDLPKAFVSKIKMNGVKVYASARNIG 1057
              N    WG+G  + G+      S+V +R + L +DLPK +++K     VKV A   N+ 
Sbjct: 882  --NIYKYWGDGGSDMGSCFLVDKSYVKLRSVVLGWDLPKRWLAKTPFQAVKVSAYGNNL- 938

Query: 1058 FLYNNAPDNLNVNDFTSTG 1076
            F++  + +     + TS G
Sbjct: 939  FVWTPSSNTFIDPEMTSFG 957